LOCUS BG067341 933 bp mRNA linear EST 26-JAN-2001
DEFINITION H3053C11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3053C11 3', mRNA sequence.
ACCESSION BG067341
VERSION BG067341.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 933)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3053C11-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3053 row: C column: 11
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..933
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3053C11-3"
/db_xref="taxon:10090"
/clone="H3053C11"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 218 a 209 c 207 g 299 t
ORIGIN
1 ccgttttgtt tttttgtttt actattttat acagggtttc ttttaccagt cttaatttgt
61 ctataacttg atagtcttta gactgtcagg atcattgctc tttaggatgc ctgggcggtt
121 agatttgcca tctgatttct tttagccaca gcatcttagg tctttctctg cagatgtcta
181 tatatataga gcttgtatta aagccacaag tttagctttc tgggctgaag tccctttagg
241 gaggctgctg gcctagatca cttgctttct gtccatcact gcactgctgt ccccgccttc
301 cgcttaccct taacctcgag gctactgcca tccgtgtacc agctcaaact ctcaggccaa
361 ggctgatctg atctttcaga tcatttcgag tatgagtttc ttctgccaga atgtcagcac
421 aatgatgagt aggtgaagtc tcaggcagta gtgagattga ggatagcagg gggagcgaag
481 gtcactcgtt cagtcaacaa aaagctctga caatgtgtcc atcggtcagg gggacggttg
541 gataatgttt tcaagagcgt tagtcagcca tcggtcatgg gggctgaacc acactttcta
601 ggacatgtgc caagttttgt ctcagagtca atttatctgc gtccttgacc agaagccact
661 atgtgcagac aagcaggcca tcctacagcc accaggtcta attttttata caagtatgcc
721 acaggtcttt tttagggtcc aatctctgag taagaacttc ttttggcaat acctttgttc
781 tcagtcacat ctaggagtcc catagctggg gataacatta gggcagtctc aagagcatct
841 aaggccatgt aagattgttc cttttgtttg ttctttatac gaagggctgt ttatctcttg
901 actcagcaaa actggaatcc acatctgcaa agc
//