LOCUS BG067001 657 bp mRNA linear EST 12-MAY-2010
DEFINITION H3049D12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3049D12 3', mRNA sequence.
ACCESSION BG067001
VERSION BG067001.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 657)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG067001.1.
Other_ESTs: H3049D12-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3049 row: D column: 12
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..657
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3049D12-3"
/db_xref="taxon:10090"
/clone="H3049D12"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 216 a 137 c 159 g 145 t
ORIGIN
1 catagcaaaa tgcctttatt gttacattct tgaactttgt aaaaaacaaa caaacaaaca
61 aacaaacagg aaaactactt atagtctgtt tcaattctta ctaaaataaa caaaagaacc
121 gaaatgagat ataagcattt taaaaagtca aagctcattt taataaagcc atgaacttga
181 aaacttactt taagctacaa agctgggtaa ggaagagttt gttctttaaa agcatctcat
241 ctgttctcag ttatcgactt aactacatcc tgaatctagg acctcagaaa gcacaacgga
301 actgcaaact gctcaggctc tgaacagatc gcaggggcct gcttccatcg caactgaggg
361 agaacagtta ctgcagagat agatcagtaa ggccacagtg agctctgccc tggaccactg
421 agacagcctg gaggggtgag gcggggcggg gaggaggtgg gctgtagctg atctgaagag
481 aatcggctag aacagctggt aaggagcagc ctggggtgga caggaaggct gtcaccacca
541 catcttacag gtggccttcc ccttgacaag ccaaggagga gccgtttaaa gatgttcgca
601 gtggcactta cagtggtaca gtcttcgaga cagcgagtga aagcagcaac gctggaa
//