LOCUS BG066753 656 bp mRNA linear EST 26-JAN-2001 DEFINITION H3046E07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3046E07 3', mRNA sequence. ACCESSION BG066753 VERSION BG066753.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 656) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3046E07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3046 row: E column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..656 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3046E07-3" /db_xref="taxon:10090" /clone="H3046E07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 128 a 152 c 153 g 223 t ORIGIN 1 ggccctggcg ttcccctgta ctggggcata tacagtttgc gtgtccaatg ggcctctctt 61 tccagtgatg gcagactagg ccatcttctg attcatatgc agctagagtc aagagctccg 121 gggtactggt tagttcataa tgttgttcca cctatagggt tacatatccc tttagctcct 181 tgggtacttt ctctaggtcc tccattggga accctgtgat ccatccaata gctgactgtg 241 agcatccacg tttgtgtttg ctaagcccct gcacagtctc acaagagaca gctacatctg 301 ggttctttcg ataaaatctt gctagtgtat gcaatggtgt cagtgtttgg aagctgatta 361 tggggtggat ccctggatat ggcagtctct agatggtcca tcctttcgtc ttttcgtctc 421 agctccaaac tttgtctctg taactccttc catgggtgtt ttgttcccga ttctaaggag 481 gggcatagtg tccacacttc agtcttcatt cttcttgagt ttcatgtgtt aatcaaattg 541 tatctgatat cttgggtatc ctaggttttg ggctaatatc cacttagcag ggagtacata 601 ttgtgtgagt tcctttgtga ttgtgttacc tcactcagga tgatgccctc caggtc //