LOCUS BG066709 680 bp mRNA linear EST 12-MAY-2010
DEFINITION H3046A11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3046A11 3', mRNA sequence.
ACCESSION BG066709
VERSION BG066709.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 680)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG066709.1.
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3046 row: A column: 11
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..680
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3046A11-3"
/db_xref="taxon:10090"
/clone="H3046A11"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 185 a 160 c 151 g 184 t
ORIGIN
1 ggaagaccac aaagaaagga agaagatcta ggtgtatgta ggactgagta tcaagatatc
61 gggccacaca gcactgggta ggatgagacc ctccgtaagt actgtttccc accaaagcat
121 gtatttcaaa acaaactcac tctgtatcct tggactataa gggtcttcaa ttttgaaagc
181 aggatctaaa gcacgaaata ttacctctcc ttctgtcgag ggctcaatgt cagaatatcg
241 agagtcacag atgatgtcat ccactttctt catgggtcca gttgaaatgc ctgggaacga
301 gctctcacag tcgtaggcga agtatctgta cacgccccaa gccttcccaa agtcagaaga
361 ccgctcgatc agcatggcgg ctgggcggaa tgtctaaaag caggaggaaa gtctcattcc
421 atggttctgc ttgctactct gtccttttgt ccctcctgtg tgcctaagct gactgtgtgc
481 ttggtatttc tgtggagact gttcttgaaa ggccgcactt gtagcaacca cctggtagac
541 cagtaaactg ttccttcttg aagctgatta taaacaggcc cttgtagcaa acacacttgg
601 gtatattaac caccatgccc aggagagaac taattttgaa tgcttgcttt ctcacttctt
661 catttaatca ttccatagat
//