LOCUS BG065796 795 bp mRNA linear EST 12-MAY-2010
DEFINITION H3035D05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3035D05 3', mRNA sequence.
ACCESSION BG065796
VERSION BG065796.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 795)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG065796.1.
Other_ESTs: H3035D05-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3035 row: D column: 05
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..795
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3035D05-3"
/db_xref="taxon:10090"
/clone="H3035D05"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 248 a 191 c 158 g 198 t
ORIGIN
1 ggttttttga gatagggttt ctctgtctca aaaaacaaac aaacaaacaa taaaacagac
61 ccttgaaaaa cattcttaga cccaaatttc agtctataaa caccaagact attcaactgt
121 atcattacta tgttaagggc aattatttga agctgggttt tatagcacac acttttagtc
181 caaatactca agaggcagag acaaatggat ctctgtgagt tccaggccag ccaaagctac
241 attgtaagac tctacctcaa aattaagtaa gtaagtaagt aaataaataa ataaataaaa
301 tttaaaaagc cagatgtgat ggcacactct ccagccccag gtctcctata gaggaaaacc
361 gcccagctaa cccagggtgc acggtacagc aacagtaggg agatcctgcc ccaacaagat
421 gaaaggtaag aactaactcc tgaaagttgt cctttcagac agacagacaa acagacagac
481 agacagacaa ggttaatcag tctctccctc atatattcag tttaaacact gcacaggcct
541 acaatcttag tgagctgttt acaaacagca gtgtctgtcg ggaagacaca agggtgactt
601 tccaaggctc cagccccagc acataccttg gcctccttgg agctgctggg acccttgcct
661 tcagtcttct tctgcttcgc tgtggaggag gagctgctct tgctgctgct gccactgttc
721 tctttgctgc tggtccactg gactttaagg acgacgactg actgacagtc ctcttccgag
781 aaacatgctc tgttt
//