LOCUS BG065213 834 bp mRNA linear EST 12-MAY-2010
DEFINITION H3028E09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3028E09 3', mRNA sequence.
ACCESSION BG065213
VERSION BG065213.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 834)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG065213.1.
Other_ESTs: H3028E09-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3028 row: E column: 09
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..834
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3028E09-3"
/db_xref="taxon:10090"
/clone="H3028E09"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 281 a 182 c 171 g 200 t
ORIGIN
1 aacgctttat taatgtttat ttctaataac aagaaacaga acatcagtcc cttatttgta
61 caaaaatacc tgaaagttta caattaggtt cacgagccaa agagctatat agcacaaggt
121 gaagcaaagc acgcgggata aaggttttgt ctattagtta acaccctctg cattccctga
181 aaacggttac atgtcaggtc attttaccgg tcactgcagt ttgcactatg acatcacaaa
241 tctacgatga gctagaagcg ccctcggagg cacagcgatc gaacaggctg tcaggtattt
301 aagtgcagaa aggggaagac aaaacatcta agctgaggca catatttctt caaagtttaa
361 gcaaacaata aaagaaaaaa gaaaacacgt ttggaaactc ttaacaccta ataatagaac
421 agagtctacc tattaaaacc ctaaaaaccc aaagcatttg gcagtttcct tctcaactta
481 gtccaggtgg ttacacggag tcgtcattta gaaaagaaaa tcacaggcag agattacaaa
541 gtcaaacagg ctccaaaaca accctgagct gtccccttta cattcatgtc aattaaatac
601 aaaaataaaa gtcaattgtc cttcagtctc tgattagggg ggctgggaac cgctaaccta
661 gggaccagct gtttcaggtg gaattcccag ctgcctgtgc aaagggctgg cgatctcggg
721 gccactgaag tctgctacac tcaaggtggg tgggttgcag ccttcaacaa ttcacttcgg
781 caagggaagt acaagttcta cgtcaaacca gctacgtacg aaattgtgac caga
//