LOCUS BG064928 644 bp mRNA linear EST 12-MAY-2010
DEFINITION H3025D09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3025D09 3', mRNA sequence.
ACCESSION BG064928
VERSION BG064928.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 644)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG064928.1.
Other_ESTs: H3025D09-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3025 row: D column: 09
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..644
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3025D09-3"
/db_xref="taxon:10090"
/clone="H3025D09"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 203 a 101 c 152 g 188 t
ORIGIN
1 agtaatgcac acaataatca tctttattga gaaacaaaaa tcacatgaaa taaaatcagg
61 atcttcaagg aaaatgtagg gcataatgtc atcagggtca aacagctgca acgtatctgg
121 aatgaaaaca atgtggggcc ccagggagaa attgttttat tagctttgaa taatgccttg
181 tgttttgagt tagctctttc tcttcttcaa gtcaaatgta agcaccactt ggggcaggat
241 tggtaaatgg tgcagttagc tgagaaacga ccatctcaaa atggtccttg ggtggatttg
301 agaagttagt cttgctttca ttttattaaa taaaattctt tctgagtgga cataggaagc
361 aaggtgtctt acttccctat taataggatg ctttaggttt aggccgcaca ccaggaaccc
421 caaatgactt tgagagctat gagtatttgg acattgactc aaggcagtgt gatattaagg
481 gtaaaggtag ccgctcctcc caaatggagg gtagaatgga gaatattctg gaagtttcaa
541 gggggcacaa cagacaagga tttgataggg aagctacttc atttatattg gagctagaga
601 gtttaggagc ttaatttacg taaagccata gtttaagttt agct
//