LOCUS BG064581 560 bp mRNA linear EST 17-DEC-2003
DEFINITION H3021E01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3021E01 3', mRNA sequence.
ACCESSION BG064581
VERSION BG064581.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 560)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT On Jan 26, 2001 this sequence version replaced BG064581.1.
Other_ESTs: H3021E01-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3021 row: E column: 01
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..560
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3021E01-3"
/db_xref="taxon:10090"
/clone="H3021E01"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 198 a 112 c 123 g 127 t
ORIGIN
1 cttttaaatt ttattatcat ttagcaatgg gaaaatgcaa tttatttaca ccagcagcca
61 tatgggcagg gggaacacaa gagttaatta gctatttgta taggacggat tacttattaa
121 aaaataagaa tctccaaaac aaaggacagg ggtgaatttc aaactaccct cccccaatga
181 tcccagcatg cgataatgcc aggtagtggc ccctgggcat gcgatggtgg gaactaattt
241 actgaagaaa aaagcacaaa ccacagaaaa tgtaaagaac cccttccccc tatacacaca
301 ctcagataca taataggatt actggttggt caatacaatg aacagaagag gaaggatagg
361 attctgctgt tacaggaggg caggggaagg ggagggctcc taaccactgt caactatatg
421 ctggagaaca tttgctccca aaaaagtagt ttgttccctc agggcaataa tagctggact
481 gaacccacct tttatctaca cagagtgggg agctacagcc ctaatgaaaa tgttggagac
541 agaaaacaaa agcagtaaca
//