LOCUS BG064473 740 bp mRNA linear EST 12-MAY-2010 DEFINITION H3020B07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3020B07 3', mRNA sequence. ACCESSION BG064473 VERSION BG064473.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 740) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064473.1. Other_ESTs: H3020B07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3020 row: B column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..740 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3020B07-3" /db_xref="taxon:10090" /clone="H3020B07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 197 a 184 c 136 g 223 t ORIGIN 1 gcagcaataa atgaacatgc attagagagg atgtatgcat taacgtatct gacagagcta 61 gagctagggt gctaggtaga acaaactcgt ctttcaaata tcaatctcct ttcccttaaa 121 aacttactga ttctaccaag aaaatacaaa accataaggc tgtaagtaaa tgagtcatgt 181 ttaggctatt acagggcggc cgtcctcaag gccagtcact gctcactgct gcttgcactc 241 ggctgggttc tgatccttct ttgggtcata gtctggatcg ttttcctcat ctccttcttc 301 ttccccttcc tcgtcagctt cttcaccttc ttcatcataa tcatcgtcat cgtcctcgat 361 agcctctcca gtgaagtaca gcactgatct tgggattatg cgctcacgta aaaagtgacc 421 aatttcaaag tctgcagcca gtatcgcctc agcatcatca tccagatcgc cattctcagg 481 aacttcagga ggagcaaaaa aattaaagaa agaatcattg gaaactgttt tagtcacagt 541 acgaactgtc ccacgcccct tgtgtttctg cttcttctta atggttttca aagtaacatt 601 ctttcctttt ttccaatcta tctggcaccc tgtacagccc ataatctctg gtccgtcaaa 661 agaaaagggg tcagaatcat ctggctctga ccgcatcctg taagtctttg ttaacacttc 721 atttgtgaaa tagtcattgg //