LOCUS BG063401 581 bp mRNA linear EST 26-JAN-2001
DEFINITION H3006G12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3006G12 3', mRNA sequence.
ACCESSION BG063401
VERSION BG063401.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 581)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3006G12-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3006 row: G column: 12
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..581
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3006G12-3"
/db_xref="taxon:10090"
/clone="H3006G12"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 173 a 136 c 129 g 143 t
ORIGIN
1 aaatctactt attttattta tgtgagtaca ctgtagttgt cttcagacac accagagagg
61 gcagcagatc ttattacaga tggctgtgaa gccgggcgcg gtggtgcacg cctttaatcc
121 cagcactcgg gaggcagagg caggtggatt tctgagttcg aggccagcct ggtctacaaa
181 gtgagttcca ggagagccag ggctatacag agaaacctgt ctcgaaaaac caaaaaagaa
241 aaaaaaaaag atggctgtga gccaccatgt agttgctggg tttgaaccca ggacctttgg
301 aagagcaatc agtgctctta accactgagc catctctccc tcttcatgag gcttaaccag
361 agagcaaagt ctctgctggg cttttatgag acttcctttg tcaatgcaac taatctgaat
421 ctcttcacgt cagccttagg cagactcttc agacaagggc aaaaagtagc cacattcttg
481 aataccacaa aagcagtctc taggccacat attgaaattc tccactgaaa tctcttggac
541 caggtccaaa taattcaaat cactctcagt aacaaagtct t
//