LOCUS BG063028 557 bp mRNA linear EST 12-MAY-2010
DEFINITION H3001C02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3001C02 3', mRNA sequence.
ACCESSION BG063028
VERSION BG063028.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 557)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG063028.1.
Other_ESTs: H3001C02-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3001 row: C column: 02
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..557
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3001C02-3"
/db_xref="taxon:10090"
/clone="H3001C02"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 187 a 109 c 111 g 150 t
ORIGIN
1 gaggatcaca ctcccatctt caatagcaaa tatacatgat aataaatttg ttattaacag
61 caggaccaaa tgatgaataa ggcaaagaca tttaagttag gggttgtgtc atcaacacaa
121 tccgttaact ggaggagcaa actcactcat gtagatctaa attcaagcct ttttttggtg
181 gtggttccac caggcaaaga caacgaaaat atatcatcaa tacccacgcg gcacagtctg
241 attctgggga ttagaaaggg tggcaggtca agtcgaggaa ggtaccatca gcccaagcaa
301 aaagcccggg tttggctttg tgagtagatg tatgtgtgtg tatacaaatc tatatgtgtg
361 tgtgtatata catatatata tatatacaca tacataaata cgcacgcata tctctgatgg
421 tctatgcttc agtaagggaa aattttcaca ctttgataac attgtacaaa aggcatcagc
481 tcccatttca acaacaaatg ggaagacttc acagttcaac cattagaatc taccctggaa
541 ctctccaagt gtcagct
//