LOCUS BC083511 1290 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA
clone MGC:88685 IMAGE:3536969), complete cds.
ACCESSION BC083511
VERSION BC083511.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1290)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1290)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: a Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7669491.
FEATURES Location/Qualifiers
source 1..1290
/db_xref="H-InvDB:HIT000266041"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88685 IMAGE:3536969"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1290
/gene="GAPDH"
/gene_synonym="G3PD"
/db_xref="GeneID:2597"
/db_xref="HGNC:HGNC:4141"
/db_xref="MIM:138400"
CDS 53..1060
/gene="GAPDH"
/gene_synonym="G3PD"
/codon_start=1
/product="glyceraldehyde-3-phosphate dehydrogenase"
/protein_id="AAH83511.1"
/db_xref="GeneID:2597"
/db_xref="HGNC:HGNC:4141"
/db_xref="MIM:138400"
/translation="MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMV
YMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVF
TTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPL
AKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVG
KVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGY
TEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMASK
E"
BASE COUNT 323 a 383 c 324 g 260 t
ORIGIN
1 gtcagccgca tcttcttttg cgtcgccagc cgagccacat cgctcagaca ccatggggaa
61 ggtgaaggtc ggagtcaacg gatttggtcg tattgggcgc ctggtcacca gggctgcttt
121 taactctggt aaagtggata ttgttgccat caatgacccc ttcattgacc tcaactacat
181 ggtttacatg ttccaatatg attccaccca tggcaaattc catggcaccg tcaaggctga
241 gaacgggaag cttgtcatca atggaaatcc catcaccatc ttccaggagc gagatccctc
301 caaaatcaag tggggcgatg ctggcgctga gtacgtcgtg gagtccactg gcgtcttcac
361 caccatggag aaggctgggg ctcatttgca ggggggagcc aaaagggtca tcatctctgc
421 cccctctgct gatgccccca tgttcgtcat gggtgtgaac catgagaagt atgacaacag
481 cctcaagatc atcagcaatg cctcctgcac caccaactgc ttagcacccc tggccaaggt
541 catccatgac aactttggta tcgtggaagg actcatgacc acagtccatg ccatcactgc
601 cacccagaag actgtggatg gcccctccgg gaaactgtgg cgtgatggcc gcggggctct
661 ccagaacatc atccctgcct ctactggcgc tgccaaggct gtgggcaagg tcatccctga
721 gctgaacggg aagctcactg gcatggcctt ccgtgtcccc actgccaacg tgtcagtggt
781 ggacctgacc tgccgtctag aaaaacctgc caaatatgat gacatcaaga aggtggtgaa
841 gcaggcgtcg gagggccccc tcaagggcat cctgggctac actgagcacc aggtggtctc
901 ctctgacttc aacagcgaca cccactcctc cacctttgac gctggggctg gcattgccct
961 caacgaccac tttgtcaagc tcatttcctg gtatgacaac gaatttggct acagcaacag
1021 ggtggtggac ctcatggccc acatggcctc caaggagtaa gacccctgga ccaccagccc
1081 cagcaagagc acaagaggaa gagagagacc ctcactgctg gggagtccct gccacactca
1141 gtcccccacc acactgaatc tcccctcctc acagttgcca tgtagacccc ttgaagaggg
1201 gaggggccta gggagccgca ccttgtcatg taccatcaat aaagtaccct gtgctcaacc
1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//