LOCUS BC082972 2231 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cytoskeleton-associated protein 4, mRNA (cDNA clone
MGC:99554 IMAGE:6084968), complete cds.
ACCESSION BC082972
VERSION BC082972.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2231)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2231)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: h Column: 17.
FEATURES Location/Qualifiers
source 1..2231
/db_xref="H-InvDB:HIT000266010"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99554 IMAGE:6084968"
/tissue_type="Pancreas, ductal carcinoma"
/clone_lib="NIH_MGC_110"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2231
/gene="CKAP4"
/gene_synonym="CLIMP-63"
/gene_synonym="ERGIC-63"
/gene_synonym="p63"
/db_xref="GeneID:10970"
/db_xref="HGNC:HGNC:16991"
CDS 58..1866
/gene="CKAP4"
/gene_synonym="CLIMP-63"
/gene_synonym="ERGIC-63"
/gene_synonym="p63"
/codon_start=1
/product="cytoskeleton-associated protein 4"
/protein_id="AAH82972.1"
/db_xref="GeneID:10970"
/db_xref="HGNC:HGNC:16991"
/translation="MPSAKQRGSKGGHGAASPSEKGAHPSGGADDVAKKPPPAPQQPP
PPPAPHPQQHPQQHPQNQAHGKGGHRGGGGGGGKSSSSSSASAAAAAAAASSSASCSR
RLGRALNFLFYLALVAAAAFSGWCVHHVLEEVQQVRRSHQDFSRQREELGQGLQGVEQ
KVQSLQATFGTFESILRSSQHKQDLTEKAVKQGESEVSRISEVLQKLQNEILKDLSDG
IHVVKDARERDFTSLENTVEERLTELTKSINDNIAIFTEVQKRSQKEINDMKAKVASL
EESEGNKQDLKALKEAVKEIQTSAKSREWDMEALRSTLQTMESDIYTEVRELVSLKQE
QQAFKEAADTERLALQALTEKLLRSEESVSRLPEEIRRLEEELRQLKSDSHGPKEDGG
FRHSEAFEALQQKSQGLDSRLQHVEDGVLSMQVASARQTESLESLLSKSQEHEQRLAA
LQGRLEGLGSSEADQDGLASTVRSLGETQLVLYGDVEELKRSVGELPSTVESLQKVQE
QVHTLLSQDQAQAARLPPQDFLDRLSSLDNLKASVSQVEADLKMLRTAVDSLVAYSVK
IETNENNLESAKGLLDDLRNDLDRLFVKVEKIHEKV"
BASE COUNT 525 a 645 c 675 g 386 t
ORIGIN
1 agccaatggg gctcgctcgc ctcccagccc gcggcccgag ccgccgccgc gcccgccatg
61 ccctcggcca aacaaagggg ctccaagggc ggccacggcg ccgcgagccc ctcggagaag
121 ggtgcccacc cgtcgggcgg cgcggatgac gtggcgaaga agccgccgcc ggcgccgcag
181 cagccgccgc cgccgcccgc gccgcacccg cagcagcacc cgcagcagca cccgcagaac
241 caggcgcacg gcaagggcgg ccaccgcggc ggcggcggcg gcggcggcaa gtcctcctcc
301 tcctcctccg cctccgccgc cgctgccgcc gccgccgcct cgtcctcggc gtcctgctcg
361 cgcaggctcg gcagggcgct caactttctc ttctacctcg ccctggtggc ggcggccgct
421 ttctcgggct ggtgcgtcca ccacgtcctg gaggaggtcc agcaggtccg gcgcagccac
481 caggacttct cccggcagag ggaggagctg ggccagggct tgcagggcgt cgagcagaag
541 gtgcagtctt tgcaagccac atttggaact tttgagtcca tcttgagaag ctcccaacat
601 aaacaagacc tcacagagaa agctgtgaag caaggggaga gtgaggtcag ccggatcagc
661 gaagtgctgc agaaactcca gaatgagatt ctcaaagacc tctcggatgg gatccatgtg
721 gtgaaggacg cccgggagcg ggacttcacg tccctggaga acacggtgga ggagcggctg
781 acggagctca ccaaatccat caacgacaac atcgccatct tcacagaagt ccagaagagg
841 agccagaagg agatcaatga catgaaggca aaggttgcct ccctggaaga atctgagggg
901 aacaagcagg atttgaaagc cttaaaggaa gctgtgaagg agatacagac ctcagccaag
961 tccagagagt gggacatgga ggccctgaga agtacccttc agactatgga gtctgacatc
1021 tacaccgagg tccgcgagct ggtgagcctc aagcaggagc agcaggcttt caaggaggcg
1081 gccgacacgg agcggctcgc cctgcaggcc ctcacggaga agcttctcag gtctgaggag
1141 tccgtctccc gcctcccgga ggagatccgg agactggagg aagagctccg ccagctgaag
1201 tccgattccc acgggccgaa ggaggacgga ggcttcagac actcggaagc ctttgaggca
1261 ctccagcaaa agagtcaggg actggactcc aggctccagc acgtggagga tggggtgctc
1321 tccatgcagg tggcttctgc gcgccagacc gagagcctgg agtccctcct gtccaagagc
1381 caggagcacg agcagcgcct ggccgccctg caggggcgcc tggaaggcct cgggtcctca
1441 gaggcagacc aggatggcct ggccagcacg gtgaggagcc tgggcgagac ccagctggtg
1501 ctctacggtg acgtggagga gctgaagagg agtgtgggcg agctccccag caccgtggaa
1561 tcactccaga aggtgcagga gcaggtgcac acgctgctca gtcaggacca agcccaggcc
1621 gcccgtctgc ctcctcagga cttcctggac agactttctt ctctagacaa cctgaaagcc
1681 tcagtcagcc aagtggaggc ggacttgaaa atgctcagga ctgctgtgga cagtttggtt
1741 gcatactcgg tcaaaataga aaccaacgag aacaatctgg aatcagccaa gggtttacta
1801 gatgacctga ggaatgatct ggataggttg tttgtgaaag tggagaagat tcacgaaaag
1861 gtctaaatga attgcgtgtg cagggcgcgg atttaaagtc caatttctca tgaccaaaaa
1921 atgtgtggtt ttttcccatg tgtcccctac cccccaattt cttgtcccct cttaaagagc
1981 agttgtcacc acctgaacac caaggcattg tattttcatg cccagttaac ttatttacaa
2041 tatttaagtt ctctgcttct gcatttggtt ggtttcctga agcgcagccc ctgtgaataa
2101 caggtggctt ttcatggatg tctctagtca gagaaaaatg ataaaggctt aaattgagga
2161 ttaacagaag cagattaacc tcagaaatcc tgtctggctg gcagatttca agtaaaaaaa
2221 aaaaaaaaaa a
//