LOCUS BC082962 2522 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens ankyrin repeat and LEM domain containing 2, mRNA (cDNA
clone IMAGE:5473642), partial cds.
ACCESSION BC082962
VERSION BC082962.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2522)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2522)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: g Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2522
/db_xref="H-InvDB:HIT000266001"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5473642"
/tissue_type="Skin, melanoma, amelanotic"
/clone_lib="NIH_MGC_41"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2522
/gene="ANKLE2"
/gene_synonym="LEMD7"
/db_xref="GeneID:23141"
/db_xref="HGNC:HGNC:29101"
CDS <1..915
/gene="ANKLE2"
/gene_synonym="LEMD7"
/codon_start=1
/product="ANKLE2 protein"
/protein_id="AAH82962.1"
/db_xref="GeneID:23141"
/db_xref="HGNC:HGNC:29101"
/translation="ISVRAFLDEDDMSLEEIKNRQNAARNNSPPTVGAFGHTRCSAFP
LEQEADLIEAAEPGGPHSSRNGLCHPLNHSRTLAGKRPKAPHGEEAHLPPVSDLTVEF
DKLNLQNIGRSVSKTPDESTKTKDQILTSRINAVERDLLEPSPADQLGNGHRRTESEM
SARIAKMSLSPSSPRHEDQLEVTREPARRLFLFGEEPSKLDQDVLAALECADVDPHQF
PAVHRWKSAVLCYSPSDRQSWPSPAVKGRFKSQLPDLSGPHSYSPGRNSVAGSNPAKP
GLGSPGRYSPVHGSQLRRMARLAELAAL"
BASE COUNT 683 a 535 c 641 g 663 t
ORIGIN
1 atttccgtga gggcgtttct agatgaagat gacatgagct tggaagaaat aaaaaatcgg
61 caaaatgcag ctcgaaataa cagcccgccc acagtcggtg cttttggaca tacgaggtgc
121 agcgccttcc ccttggagca ggaggcagac ctcatagaag ccgccgagcc gggaggtcca
181 cacagcagca gaaatgggct ctgccatcct ctgaatcaca gcaggaccct ggcgggcaag
241 agaccaaagg ccccccatgg ggaggaagcc catctgccac ctgtctcgga tttgactgtt
301 gagtttgata aactgaattt gcaaaatata ggacgtagcg tttccaagac accagatgaa
361 agtacaaaaa ctaaagatca gatcctgact tcaagaatca atgcagtaga aagagacttg
421 ttagagcctt ctcccgcaga ccaactcggg aatggccaca ggaggacaga aagtgaaatg
481 tcagccagga tcgctaaaat gtccttgagt cccagcagcc ccaggcacga ggatcagctc
541 gaggtcacca gggaaccggc caggcggctc ttcctttttg gagaggagcc atcaaaactc
601 gatcaggatg ttttggccgc tcttgaatgt gcagacgtcg acccccatca gttcccggcc
661 gtgcacagat ggaagagtgc tgtcctgtgc tactcaccct cggacagaca gagttggccc
721 agtcccgcgg tgaaaggaag gttcaagtct cagctgccag atctcagtgg ccctcacagc
781 tacagtccgg ggagaaacag cgtggctgga agcaaccccg caaagccagg cctgggcagt
841 cctgggcgct acagccccgt gcacgggagc cagctccgca ggatggcgcg cctggctgag
901 cttgccgccc tgtaggcttg gcgctgggct ctcggtttgt tcttcatttt taaagaagga
961 agggtcatat gtttattgct aaactgtcaa aaaggaatat attctgatta aattattact
1021 cctcactttg agggtgtgag aattttagaa gatttaaatg ttctatataa cacttagatt
1081 tctgatattt tggaagaagt tagaagttaa tgaaagcaaa ctcagttacc aattttctgg
1141 aaaatatcca tgtggtaatg gtagactttt taggtggcaa tttctaggtc tgaaatatag
1201 cagaggaaag ggcgctgagg cagttgcagg caggcagccc tgtacttacc ctgtactcac
1261 ctcatccgac agacgctgtg gatgaggagg ggcttggcgg aggcgtgagc accgatgtcc
1321 ctttgataac ctgcactcac caagatgaac tatttgccgc cctgtctttt cctgggttgg
1381 ggggtggcat ctgatggtgg cagagtgcct gttggttcgc ccgtgggtct catggttcag
1441 acagagggag gtggacggca gggatcaggg agccaggagc gcgcctcaga cttgcagcaa
1501 ccattgtgat ttgggttgtt cggaatattt aaattactga tcagaagatg aaagtagctt
1561 ttctcttggg aagtcttgca gcccgtggga gtgataccag gagcaacaca gagctcagca
1621 gcggcgccaa ggtgttccct gtttcctcag cacgtgagcc ttcaccgcct gcttcattca
1681 ggagccagtg cagcagtaat acagtctata cattgttctg ttttcaaatt tatcctgagg
1741 ctttgttgag cataaatgat tatacgataa aggtatccgt tattttggaa ctcatttcag
1801 ttgggatctc ctgtatgcag agtgttgcat ttagaggttt gagtcccatc ttggtttctt
1861 gccgtgctga ctgtagcctt caccttgact tgaatgaagg tctgtggttg gaatgtgtga
1921 ggagccgctg aggtgttcag gaggtgctgc ctggaggtcg gtttcttcct gggtgttacg
1981 ggcaactgct cacacagttg tttctctgtg aacatttcca gtgtttaatc caaaatgaaa
2041 acccaccaat gcttttgcta acttcagtgc cttttataaa tcatttttaa atttcctgaa
2101 cttgcttttt gaggatatac agggatatta agtagacgca ggattgtttt tgtttgtaaa
2161 aattctgaat tgaaactttg ttttaaaaaa aggcttcttt ctttcatatg acaagagata
2221 ggtcaggaat attggaatca agatttaaat gttaaaattc gattttgtta cacagggtgt
2281 gttcatttgt tttgtagcag acaagatcta gatcccagac agaaacaaca catgctattc
2341 taaaaagccg cattttaaaa ggcaccttgg ttctcaaaag aaatcagaat atggatattc
2401 gtagtgatga tctgttttct ctaaaatctt accatattgt ctgtatatgg ttgtaaattc
2461 aaatggaaag taaaacgttt tggccctgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2521 aa
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