LOCUS BC082760 3635 bp mRNA linear HUM 21-SEP-2004
DEFINITION Homo sapiens ataxin 2-like, mRNA (cDNA clone MGC:99468
IMAGE:5812230), complete cds.
ACCESSION BC082760
VERSION BC082760.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3635)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3635)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: g Column: 18.
FEATURES Location/Qualifiers
source 1..3635
/db_xref="H-InvDB:HIT000265992"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99468 IMAGE:5812230"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_99"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..3635
/gene="ATXN2L"
/gene_synonym="A2D"
/gene_synonym="A2LG"
/gene_synonym="A2LP"
/gene_synonym="A2RP"
/db_xref="GeneID:11273"
/db_xref="MIM:607931"
CDS 9..3197
/gene="ATXN2L"
/gene_synonym="A2D"
/gene_synonym="A2LG"
/gene_synonym="A2LP"
/gene_synonym="A2RP"
/codon_start=1
/product="ATXN2L protein"
/protein_id="AAH82760.1"
/db_xref="GeneID:11273"
/db_xref="MIM:607931"
/translation="MLKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLAT
SAAPPGPPAAASPCLGPVAAAGSGLRRGAEGILAPQPPPPQQHQERPGAAAIGSARGQ
STGKGPPQSPVFEGVYNNSRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAV
DAVHRKASEPAGGPRREDIVDTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSK
VNGEHKEKVLQRWEGGDSNSDDYDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSS
YTVPLEKDNSEEFRQRELRAAQLAREIESSPQYRLRIAMENDDGRTEEEKHSAVQRQG
SGRESPSLASREGKYIPLPQRVREGPRGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSP
GPGSEARGINGGPSRMSPKAQRPLRGAKTLSSPSNRPSGETSVPPPPAVGRMYPPRSP
KSAAPAPISASCPEPPIGSAVPTSSASIPVTSSVSDPGVGSISPASPKISLAPTDVKE
LSTKEPGRTLEPQELARIAGKVPGLQNEQKRFQLEELRKFGAQFKLQPSSSPENSLDP
FPPRILKEEPKGKEKEVDGLLTSEPMGSPVSSKTESVSDKEDKPPLAPSGGTEGPEQP
PPPCPSQTGSPPVGLIKGEDKDEGPVAEQVKKSTLNPNAKEFNPTKPLLSVNKSTSTP
TSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMGPAVQAPQMYPYPVSNSVPGQ
QGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVAATPYSSYIPYNPQQFPGQ
PAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQYPSAEQPTPQALYAT
VHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLY
HPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHHQQLPHGFTNMAHVTQAHVQTGI
TAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGHPQGE
QPGQAPGFPGGADDRILQSHPSQQLPFHPPGN"
BASE COUNT 796 a 1233 c 931 g 675 t
ORIGIN
1 ctgccatcat gttgaagcct cagccgctac aacagccctc ccagccccag cagccgcccc
61 ccacgcaaca ggccgtggcc cgtcggcccc ccgggggcac cagccctccc aacggcggcc
121 tcccggggcc gctggccacc tctgcggctc ctcccgggcc tccagcggcc gcctccccct
181 gcctggggcc tgtggccgct gccgggagcg ggctccgccg gggagccgaa ggcatcttgg
241 cgccgcagcc gccgccgccg cagcaacacc aggagaggcc gggggcagcc gccatcggca
301 gcgccagggg acagagcaca ggaaagggac ccccacagtc acctgtgttt gaaggcgtct
361 acaacaattc cagaatgctg catttcctta cagctgttgt gggctccact tgtgatgtaa
421 aggtgaaaaa tggtaccact tatgagggta tcttcaagac gctaagctca aagtttgaac
481 tagccgtgga tgctgtgcac cggaaagcat ctgagccagc aggtggccct cgtcgggagg
541 acattgtgga caccatggtg tttaagccaa gtgatgtcat gcttgttcac ttccgaaatg
601 ttgacttcaa ctatgctact aaagacaagt tcaccgattc agccattgcc atgaactcga
661 aagtgaatgg ggaacacaaa gagaaggtgc ttcagcgctg ggaggggggt gacagcaaca
721 gcgacgacta tgacctcgag tctgacatgt ccaatggatg ggaccccaat gaaatgttca
781 agttcaatga ggagaactac ggtgtgaaga ctacctatga tagcagtctt tcttcttata
841 cggtgccctt agaaaaggac aactcagaag agtttcgtca gcgagagctg cgtgcggccc
901 agttggctcg agagattgaa tcaagccccc agtaccgcct acggatcgcc atggagaacg
961 acgatgggcg cactgaagag gagaagcaca gtgcagtcca gcggcagggc tcagggcggg
1021 agagccccag cttggcatcc agggagggga agtatatccc tctgcctcaa cgagtccggg
1081 aaggtccccg gggaggagtt cgatgcagca gctctcgggg cggtcggcct ggccttagct
1141 ctttgccacc tcgtggccct caccatctgg acaacagcag ccctggccca ggttctgagg
1201 cccgtggtat caatggaggc ccttcccgca tgtccccaaa ggcacagcgg cctctgagag
1261 gtgccaagac tctgtcttcg cccagtaata ggccttctgg agaaacttct gttccacctc
1321 ctcctgcagt gggccggatg tatcccccgc gttctcccaa gtctgctgcc cctgccccaa
1381 tctcagcttc ctgtccagag cctcccatcg gctcggcagt gccaacctct tcagcctcca
1441 tccctgtgac ctcatcagtc tcagatcctg gagtgggctc catttctcca gcttctccaa
1501 agatctccct ggcccccaca gatgtaaaag aactctctac caaggaacct gggagaactc
1561 tggagcccca ggagctggct cggatagctg ggaaagtccc tggtcttcag aatgaacaga
1621 aacgattcca actggaagaa ctgagaaagt ttggggccca gtttaagctt cagcccagta
1681 gctcccctga gaacagcctg gatccttttc ctccccggat cttaaaggag gagcccaaag
1741 gaaaggagaa agaggttgat ggtctgttga cttcagagcc catggggtct cccgtctcct
1801 ccaagacaga gtccgtatcg gataaggagg acaaaccacc cctggcacca tcaggaggca
1861 ctgaggggcc agagcagccc ccaccacctt gtccaagcca aactggcagc cccccggtgg
1921 gcctcatcaa gggagaagac aaagatgagg gccctgttgc tgaacaagta aagaaatcaa
1981 cgttgaaccc taatgctaag gagttcaatc ctacaaagcc tctgctgtct gtgaataaat
2041 ccaccagtac cccaacttct ccggggcccc ggactcattc aactccctcc atcccggtgc
2101 tgacagcagg ccagagtggg ctatacagcc cccagtacat ctcctacata cctcagatcc
2161 acatgggacc agctgtgcag gcacctcaga tgtatccata tcctgtatcc aattcagtgc
2221 ctgggcagca gggcaagtac cggggagcaa aaggctccct tcctccgcag cgctcggacc
2281 aacaccagcc agcctcagcc ccgccgatga tgcaggccgc cgcggctgct ggcccgcctc
2341 tggtggctgc cacgccctat tcttcctaca tcccctacaa ccctcagcag ttcccaggcc
2401 agccagccat gatgcagccc atggcccact acccctcaca gccggtgttt gcccccatgc
2461 ttcagagcaa cccacgcatg ctgacgtcgg gcagccatcc ccaggccatc gtgtcatcct
2521 ctacccctca gtacccttct gcagagcagc ctacccccca agccctttat gccactgttc
2581 accagtccta cccacaccat gccacacagc tccatgccca ccagccgcag ccggctacca
2641 cgcctactgg aagccagccg cagtcccagc atgcggcccc cagtcctgtc cagcatcagg
2701 cggggcaggc cccacacttg ggcagtggac agccacagca gaatctgtac cacccagggg
2761 ccctgacagg cacgccgccc tctctgccac cgggaccttc tgcccagtcc cctcagagca
2821 gcttccccca gccagccgct gtgtatgcca tccaccacca gcagctgccc cacggcttca
2881 ccaacatggc ccatgttacc caggcccatg tccaaactgg aatcacagca gccccgcccc
2941 ctcaccctgg ggctccccac ccgccccagg tgatgctgct gcacccaccc cagagtcatg
3001 gggggccccc ccaaggcgcg gtgccccaga gtggggtgcc tgcactctca gcttccacac
3061 cctcacccta cccctacatc ggacaccccc aaggtgagca gcctggccag gcgcctggat
3121 ttccaggagg agccgatgac aggattcttc aatctcatcc ctcccagcag ctccccttcc
3181 accccccggg gaactgaaga ttgtcctggc cgcgacctga gacctccatg agtggaggga
3241 agagtgatct atgtctcttc ccccagcagc tcggaccact cccagccccc catccccccg
3301 ttccccaggg gagctgggga attcctgcca agcaccttga atgggagggg cctcacagag
3361 ggcagggcca gggtccagca ggggtggggg gttcctgctc tgcccctgcc cgtccccacc
3421 cagtcttgcc ctcccatcct ctcatctatt cccccgctgg agacggaaga tcttttattt
3481 tctattattt ataacttcag acttgggccc cctgttcttt ctttcccatt aacttgagtg
3541 acctgtgtga gagacagaca gatgccccac gaggatggct ggacaaggac ttttactttt
3601 tattacataa aaatattaaa aaaaaaaaaa aaaaa
//