LOCUS BC082246 892 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens caveolin 1, caveolae protein, 22kDa, mRNA (cDNA clone
MGC:99576 IMAGE:5441212), complete cds.
ACCESSION BC082246
VERSION BC082246.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 892)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 892)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: f Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15451855.
FEATURES Location/Qualifiers
source 1..892
/db_xref="H-InvDB:HIT000265963"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99576 IMAGE:5441212"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..892
/gene="CAV1"
/gene_synonym="MSTP085"
/gene_synonym="VIP21"
/db_xref="GeneID:857"
/db_xref="HGNC:HGNC:1527"
/db_xref="MIM:601047"
CDS 11..547
/gene="CAV1"
/gene_synonym="MSTP085"
/gene_synonym="VIP21"
/codon_start=1
/product="caveolin 1, caveolae protein, 22kDa"
/protein_id="AAH82246.1"
/db_xref="GeneID:857"
/db_xref="HGNC:HGNC:1527"
/db_xref="MIM:601047"
/translation="MSGGKYVDSEGHLYTVPIREQGNIYKPNNKAMADELSEKQVYDA
HTKEIDLVNRDPKHLNDDVVKIDFEDVIAEPEGTHSFDGIWKASFTTFTVTKYWFYRL
LSALFGIPMALIWGIYFAILSFLHIWAVVPCIKSFLIEIQCISRVYSIYVHTVCDPLF
EAVGKIFSNVRINLQKEI"
BASE COUNT 260 a 196 c 180 g 256 t
ORIGIN
1 acgggccagc atgtctgggg gcaaatacgt agactcggag ggacatctct acaccgttcc
61 catccgggaa cagggcaaca tctacaagcc caacaacaag gccatggcag acgagctgag
121 cgagaagcaa gtgtacgacg cgcacaccaa ggagatcgac ctggtcaacc gcgaccctaa
181 acacctcaac gatgacgtgg tcaagattga ctttgaagat gtgattgcag aaccagaagg
241 gacacacagt tttgacggca tttggaaggc cagcttcacc accttcactg tgacgaaata
301 ctggttttac cgcttgctgt ctgccctctt tggcatcccg atggcactca tctggggcat
361 ttacttcgcc attctctctt tcctgcacat ctgggcagtt gtaccatgca ttaagagctt
421 cctgattgag attcagtgca tcagccgtgt ctattccatc tacgtccaca ccgtctgtga
481 cccactcttt gaagctgttg ggaaaatatt cagcaatgtc cgcatcaact tgcagaaaga
541 aatataaatg acatttcaag gatagaagta tacctgattt tttttccttt taattttcct
601 ggtgccaatt tcaagttcca agttgctaat acagcaacaa tttatgaatt gaattatctt
661 ggttgaaaat aaaaagatca ctttctcagt tttcataagt attatgtctc ttctgagcta
721 tttcatctat ttttggcagt ctgaattttt aaaacccatt taaatttttt tccttacctt
781 tttatttgca tgtggatcaa ccatcgcttt attggctgag atatgaacat attgttgaaa
841 ggtaatttga gagaaatatg aagaactgag gaggaaaaaa aaaaaaaaaa aa
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