LOCUS BC080648 1359 bp mRNA linear HUM 24-JAN-2005
DEFINITION Homo sapiens low density lipoprotein receptor-related protein 10,
mRNA (cDNA clone IMAGE:6728330), partial cds.
ACCESSION BC080648
VERSION BC080648.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1359)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1359)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: p Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32490558.
FEATURES Location/Qualifiers
source 1..1359
/db_xref="H-InvDB:HIT000265910"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6728330"
/tissue_type="Breast, adenocarcinoma"
/clone_lib="NIH_MGC_107"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1359
/gene="LRP10"
/gene_synonym="DKFZP564C1940"
/gene_synonym="MGC8675"
/gene_synonym="MST087"
/gene_synonym="MSTP087"
/db_xref="GeneID:26020"
CDS <1..788
/gene="LRP10"
/gene_synonym="DKFZP564C1940"
/gene_synonym="MGC8675"
/gene_synonym="MST087"
/gene_synonym="MSTP087"
/codon_start=3
/product="LRP10 protein"
/protein_id="AAH80648.1"
/db_xref="GeneID:26020"
/translation="GLLLVIALGCTCKLYAIRTQEYSIFAPLSRMEAEIVQQQAPPSY
GQLIAQGAIPPVEDFPTENPNDNSVLGNLRSLLQILRQDMTPGGGPGARRRQRGRLMR
RLVRRLRRWGLLPRTNTPARASEARSQVTPSAAPLEALDGGTGPAREGGAVGGQDGEQ
APPLPIKAPLPSASTSPAPTTVPEAPGPLPSLPLEPSLLSGVVQALRGRLLPSLGPPG
PTRSPPGPHTAVLALEDEDDVLLVPLAEPGVWVAEAEDEPLLT"
BASE COUNT 284 a 446 c 356 g 273 t
ORIGIN
1 gcggcctgct cctggtcatc gccctgggct gcacctgcaa gctctatgcc attcgcaccc
61 aggagtacag catctttgcc cccctctccc ggatggaggc tgagattgtg cagcagcagg
121 cacccccttc ctacgggcag ctcattgccc agggtgccat cccacctgta gaagactttc
181 ctacagagaa tcctaatgat aactcagtgc tgggcaacct gcgttctctg ctacagatct
241 tacgccagga tatgactcca ggaggtggcc caggtgcccg ccgtcgtcag cggggccgct
301 tgatgcgacg cctggtacgc cgtctccgcc gctggggctt gctccctcga accaacaccc
361 cggctcgggc ctctgaggcc agatcccagg tcacaccttc tgctgctccc cttgaggccc
421 tagatggtgg cacaggtcca gcccgtgagg gcggggcagt gggtgggcaa gatggggagc
481 aggcaccccc actgcccatc aaggctcccc tcccatctgc tagcacgtct ccagccccca
541 ctactgtccc tgaagcccca gggccactgc cctcactgcc cctagagcca tcactattgt
601 ctggagtggt gcaggccctg cgaggccgcc tgttgcccag cctggggccc ccaggaccaa
661 cccggagccc ccctggaccc cacacagcag tcctggccct ggaagatgag gacgatgtgc
721 tactggtgcc actggctgag ccgggggtgt gggtagctga ggcagaggat gagccactgc
781 ttacctgagg ggacctgggg gctctactga ggcctctccc ctgggggctc tactcatagt
841 ggcacaacct tttagaggtg ggtcagcctc ccctccacca cttccttccc tgtccctgga
901 tttcagggac ttggtgggcc tcccgttgac cctatgtagc tgctataaag ttaagtgtcc
961 ctcaggcagg gagagggctc acagagtctc ctctgtacgt ggccatggcc agacacccca
1021 gtcccttcac caccacctgc tccccacgcc accaccattt gggtggctgt ttttaaaaag
1081 taaagttctt agaggatcat aggtctggac actccatcct tgccaaacct ctacccaaaa
1141 gtggccttaa gcaccggaat gccaattaac tagagaccct ccagccccca aggggaggat
1201 ttgggcagaa cctgaggttt tgccatccac aatccctcct acagggcctg gctcacaaaa
1261 agagtgcaac aaatgcttct attccatagc tacggcattg ctcagtaagt tgaggtcaaa
1321 aataaaggaa tcatacatct caaaaaaaaa aaaaaaaaa
//