LOCUS BC080640 1377 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens growth hormone regulated TBC protein 1, mRNA (cDNA
clone IMAGE:6644085).
ACCESSION BC080640
VERSION BC080640.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1377)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1377)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: o Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376022.
FEATURES Location/Qualifiers
source 1..1377
/db_xref="H-InvDB:HIT000265903"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6644085"
/tissue_type="Ovary, teratocarcinoma"
/clone_lib="NIH_MGC_109"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1377
/gene="GRTP1"
/gene_synonym="TBC1D6"
/db_xref="GeneID:79774"
/db_xref="HGNC:HGNC:20310"
CDS <1..1065
/gene="GRTP1"
/gene_synonym="TBC1D6"
/codon_start=1
/product="growth hormone regulated TBC protein 1"
/protein_id="AAH80640.1"
/db_xref="GeneID:79774"
/db_xref="HGNC:HGNC:20310"
/translation="GRRTWDPLASLGARLPPRMQPAERSRVPRIDPYGFERPEDFDDA
AYEKFFSSYLVTLTRRAIKWSRLLQGGGVPRSRTVKRYVRKGVPLEHRARVWMVLSGA
QAQMDQNPGYYHQLLQGERNPRLEDAIRTDLNRTFPDNVKFRKTTDPCLQRTLYNVLL
AYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILPDYYSPAMLGLKTD
QEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFNEG
SKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVMECHTFMQKIFSEPGSL
SMATVAKLRESCRARLLAQG"
BASE COUNT 322 a 351 c 383 g 321 t
ORIGIN
1 gggaggcgaa cttgggaccc gctggcctcg ctcggtgcgc gcctccctcc ccgcatgcag
61 cccgccgagc gctcgcgggt ccccaggatc gacccgtacg gattcgagcg gcctgaggac
121 ttcgacgacg ccgcctacga gaagtttttc tccagctacc tggtcacgct cacccgcagg
181 gcgatcaaat ggtcccggct gctgcagggc gggggcgtcc ccaggagccg gacagtgaag
241 cgctatgtcc ggaaaggggt cccgctggag caccgtgccc gcgtctggat ggtgctgagt
301 ggggcccagg cgcagatgga ccagaatccc ggctactacc accagcttct ccagggagag
361 agaaacccca ggctggagga cgccatcagg acagacctga accggacctt ccccgacaac
421 gtgaagttcc ggaagaccac ggacccctgc ttacagagga ccctgtacaa tgtgctgctg
481 gcatatgggc accataacca gggagtgggc tactgccagg gaatgaattt tatagcagga
541 tatctgattc ttataacaaa taatgaagaa gaatcttttt ggctgttaga tgctcttgtt
601 ggaagaatac taccagatta ctacagcccg gccatgctgg gcctgaagac cgaccaggag
661 gtcctcgggg agctggtgcg ggcgaagctg ccggctgtgg gggccctgat ggagcgtctc
721 ggtgtgctgt ggacgctgct ggtgtcccgc tggttcatct gcctgtttgt ggacatcttg
781 cccgtggaga cagtgcttcg gatctgggac tgtttgttta acgaaggctc gaagattatc
841 ttccgggtgg ccctgacctt aattaagcag caccaggagt tgattttgga agccaccagc
901 gttccagaca tttgcgataa gtttaagcag ataaccaaag ggagtttcgt gatggagtgt
961 cacacgttta tgcagaaaat attttcagaa cctggaagct tatccatggc caccgtcgcc
1021 aagctccgcg agagctgcag ggcccggctg ctggcacagg ggtgagcgtg cctgtcccct
1081 gcgttgctcg tctctacact gacgatgccc ctttccagag ttgacactgg accaactttc
1141 actgctttcc tttttagtgt tgtaaatact tgacatcgct acactttagt tgtgaatttt
1201 ttaaaagagc agtttaaaat caggtcattc taccagcttt tgatgattag ctatgaagtc
1261 atacttttta aagaaaactt atttttacct gagagatcaa taatatataa aatgtgagtg
1321 tgggtttgta tcatctaata aagtatgcca acacctgtga aaaaaaaaaa aaaaaaa
//