LOCUS BC080597 1273 bp mRNA linear HUM 18-JAN-2005
DEFINITION Homo sapiens WD repeat domain 42A, mRNA (cDNA clone IMAGE:4870402),
complete cds.
ACCESSION BC080597
VERSION BC080597.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1273)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1273)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: e Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30089953
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1273
/db_xref="H-InvDB:HIT000265863"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4870402"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1273
/gene="WDR42A"
/gene_synonym="H326"
/db_xref="GeneID:50717"
CDS 59..880
/gene="WDR42A"
/gene_synonym="H326"
/codon_start=1
/product="WDR42A protein"
/protein_id="AAH80597.1"
/db_xref="GeneID:50717"
/translation="MSSKGSSTDGRTDLANGSLSSSPEEMSGAEEGRETSSGIEVEAS
DLSLSLTGDDGGPNRTSTESRGTDTESSGEDKDSDSMEDTGHYSINDENRVHDRSEEE
EEEEEEEEEEQPRRRVQRKRANRDQDSSDDERALEDWVSSETSALPRPRWQALPALRE
RELGSSARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVV
VWDWVRRQPVLDFESGHKSNVFQVRQGSIIATERIRHELEKSELQHGLGADSELL"
BASE COUNT 362 a 266 c 367 g 278 t
ORIGIN
1 ctggccttac ttcagtgata aaaggaggaa aggctggcta cagcaaacat cattcaagat
61 gtccagcaaa gggagcagca cagatggcag aacagactta gctaatggaa gcctgtctag
121 cagtccagag gagatgtctg gagctgaaga ggggagggag acatcctcag gcattgaagt
181 ggaggcctca gacctgagtt tgagcttgac tggggatgat ggtggcccca accgcaccag
241 cacagaaagt cgaggcacag acacagagag ctcaggtgaa gataaggact ctgacagcat
301 ggaggacact ggtcattact ccattaatga tgaaaatcga gtccatgacc gctcagagga
361 agaggaagag gaggaagaag aggaggaaga agagcagcct cggcgccgtg tacagcgcaa
421 gcgggctaac cgtgaccagg actcatcaga tgatgagcgg gccctagagg actgggtgtc
481 ctcagaaaca tcagctctac cccgacctcg ctggcaagcc ctccctgccc ttcgggagcg
541 ggagctgggt tcaagtgccc gctttgtcta tgaggcctgt ggggcaagag tctttgtgca
601 gcgtttccgc ctgcagcatg ggcttgaggg ccatactggt tgtgtcaata ccctgcactt
661 taaccagcgc ggcacctggc tggccagtgg cagcgatgac ctgaaggtgg tggtgtggga
721 ttgggtacgg cggcagccag tactggactt tgagagtggc cacaaaagta atgtgttcca
781 ggtgaggcaa gggagcataa tagcaactga gagaatcagg catgagttag agaaatctga
841 actgcagcat ggattgggag ctgatagtga gttattgtag gaattacata tcgggacatg
901 gccctacttt ggctccccta atgacctaaa tacactgaaa gactcttggc aaccctagat
961 tccttgagca tgtggactgt tggaagcctc ataggtaggg tgcatgcagc ttattaaatg
1021 tgtgctggta ggaggcagtg tagtataagc acaggctctt gaaccaaact gcctgagttc
1081 aaatcctagc ccttctgctt actagctcag tgatcttggc caagttattt tacctttgtc
1141 ttcagtttat ctgtaaaatg ggactaataa cacatagggt tatgaggatt aagtaacaat
1201 agaagctaag cagttagaac tgtgactggt acttaataaa catttgataa atgttaaaaa
1261 aaaaaaaaaa aaa
//