LOCUS BC078665 4108 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens GRIP and coiled-coil domain containing 1, mRNA (cDNA
clone MGC:88535 IMAGE:5923117), complete cds.
ACCESSION BC078665
VERSION BC078665.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4108)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4108)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34305454.
FEATURES Location/Qualifiers
source 1..4108
/db_xref="H-InvDB:HIT000265752"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88535 IMAGE:5923117"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_47"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4108
/gene="GCC1"
/gene_synonym="FLJ22035"
/gene_synonym="GCC1P"
/gene_synonym="GCC88"
/gene_synonym="MGC20706"
/db_xref="GeneID:79571"
/db_xref="HGNC:HGNC:19095"
/db_xref="MIM:607418"
CDS 371..2698
/gene="GCC1"
/gene_synonym="FLJ22035"
/gene_synonym="GCC1P"
/gene_synonym="GCC88"
/gene_synonym="MGC20706"
/codon_start=1
/product="GRIP and coiled-coil domain containing 1"
/protein_id="AAH78665.1"
/db_xref="GeneID:79571"
/db_xref="HGNC:HGNC:19095"
/db_xref="MIM:607418"
/translation="MEKFGMNFGGGPSKKDLLETIETQKKQLLQYQARLKDVVRAYKS
LLKEKEALEASIKVLSVSHEADVGLAGVQLPGLTFPDSVDDRCSTHSEDSTGTATSLD
TAASLTSTKGEFGVEDDRPARGPPPPKSEEASWSESGVSSSSGDGPFAGGEVDKRLHQ
LKTQLATLTSSLATVTQEKSRMEASYLADKKKMKQDLEDASNKAEEERARLEGELKGL
QEQIAETKARLITQQHDRAQEQSDHALMLRELQKLLQEERTQRQDLELRLEETREALA
GRAYAAEQMEGFELQTKQLTREVEELKSELQAIRDEKNQPDPRLQELQEEAARLKSHF
QAQLQQEMRKTALAEDQLRQQSQVEEQRVAALENQISEVSELLGTYEKAKQKDQLAIQ
KLKERILQLDLENKTLALAASSRSPLDSHGEESSLDVNVLKDKMEKLKRLLQVAARKS
QVTLDVEKLCDLEIMPSSEAADGEKATALYYQQELKQLKEEFERYKMRAQVVLKSKNT
KDGNLGKELEAAQEQLAELKEKYISLRLSCEELEHQHQQEADDWKQELARLQQLHRQE
LERCQLDFRDRTLKLEEELHKQRDRALAVLTEKDLELEQLRSVALASGLPGRRSPVGG
GGPGDPADTSSSDSLTQALQLAAANEPTFFLYAEQLARKEVEITSLRKQKHRLEVEVH
QLQDRLLEEGERHREEVAALQSHIEKNIRDQSREGANLEYLKNIIYRFLTLPDSLGRQ
QTLTAILTILHFSPEEKQVIMRLPTSASWWPSGKR"
BASE COUNT 1057 a 968 c 1195 g 888 t
ORIGIN
1 gctcagcgta accctctggc cgacgtgggc cgagggggcc ggcccgggct gctgtggccc
61 agacgagcgg agagtgcgga gcggcttctg ggccagcgct aacgagccct ggcagtgcgc
121 acctctggtg ccagtgtcgc cccgcctccg gggtagaatc cgccccagcc ctccgggcct
181 gggaccgggc ggccgctttc gccagtccgt ccggccgttc cgcattaggt ccgggataac
241 taggtggagt aggtgtgcgg cccgccgccg gacagcccgc tcgctgtttc tttaagcccc
301 cgcctgcgtc ttcacggccc tctcccgttc tgctggaaag ctgacgtggg gcaatccgtt
361 cagaccctcc atggagaagt ttgggatgaa tttcgggggc ggcccgagca agaaggactt
421 gctggagact atagagaccc agaagaagca gcttctccag taccaggcac ggctcaagga
481 tgtggtccgt gcctataaaa gcctgctgaa ggagaaagag gcattagagg ccagcatcaa
541 ggtgctgtcg gtatcccacg aggcagatgt gggcctcgca ggtgtccagc ttccaggcct
601 cacctttcct gactctgtgg atgaccggtg ctccactcac agcgaggata gcactgggac
661 cgccactagc ttggatactg cggccagtct caccagcacc aagggtgagt ttggggtaga
721 agatgacaga ccggcccgtg gaccaccacc tccaaagtcc gaagaggcca gttggtccga
781 gagtggcgtt agcagtagca gtggggatgg gccatttgca ggtggggagg tggacaaaag
841 actgcaccag ctgaagactc agttggctac tttgaccagt tctttggcta cagtcactca
901 ggagaagtcc cgcatggagg cttcttactt ggctgacaag aaaaagatga aacaggactt
961 agaggatgcc agtaacaagg cggaggagga gagggcccgc ctggagggag aattgaaggg
1021 gctgcaggag caaatagcag aaaccaaagc ccggcttatc acgcagcagc atgatcgggc
1081 ccaagagcag agtgaccatg ccttgatgct gcgtgagctc cagaagctgc tgcaggagga
1141 gaggacccag cgccaggact tggagcttag gttagaagag acccgagaag ccttggcagg
1201 acgagcatat gcagctgaac agatggaagg atttgaactg cagaccaagc agctgacccg
1261 tgaggtggag gagctgaaaa gtgaactgca ggccattcga gatgagaaga atcagccaga
1321 tccccggctg caagaacttc aggaagaggc tgcccgcctt aagagccatt tccaggctca
1381 gttacagcag gaaatgagaa agacagctct tgcagaggat caactccgtc agcaatctca
1441 ggtagaagaa cagagggtgg cagccctgga gaatcaaata tccgaggtgt ctgagctgct
1501 aggcacctac gagaaagcca agcagaagga ccagctggcc attcagaagc tgaaggagcg
1561 cattctgcag ctggacctgg agaacaagac actggctcta gcagcctcca gcaggtcccc
1621 tttagacagc catggagagg agtccagtct ggatgtcaat gtcctgaaag ataagatgga
1681 gaagctgaag aggctgctgc aggttgcggc caggaaaagc caggtgaccc tggatgtgga
1741 gaagctctgt gacctggaga taatgcccag ctcggaggct gctgatgggg agaaggctac
1801 tgcactctat taccaacagg agctgaaaca gctgaaggaa gagtttgaga ggtacaagat
1861 gagagcccag gttgtcctca aaagcaagaa taccaaagat ggtaacctgg gaaaggagct
1921 ggaggcagcc caggaacagc ttgcagagct gaaggagaag tatatttccc tgcggctctc
1981 ctgcgaggag ctggagcacc aacaccagca ggaggctgat gactggaagc aggagctggc
2041 ccggctgcag cagctccacc ggcaggagct ggagcggtgc cagctggact tcagggaccg
2101 cacactgaaa ctggaggagg agctgcacaa gcagcgggat cgtgccctag ctgtgctcac
2161 cgagaaggac ttggaactgg agcaactgcg ttctgtggcc ttggcctctg ggctgccagg
2221 acgcagaagt cctgtgggtg gtggcggtcc tggggaccca gctgacacat catcctctga
2281 tagcctgacc caagcattac aacttgcagc ggccaatgag cccactttct ttctgtacgc
2341 tgagcaactg gcccgcaagg aggtggagat cacatcactg aggaagcaga agcacaggct
2401 ggaggtcgag gtgcatcagc tgcaggatcg gctgctggag gagggcgaac ggcatcgtga
2461 ggaggttgca gccctgcaga gccacatcga aaagaacatc agggaccaga gcagggaggg
2521 agccaatctg gagtacctca aaaacatcat ctaccgcttc ctgaccttac ctgactccct
2581 gggccgccag cagactctca cagccatact gactatcttg cacttcagtc cagaggagaa
2641 acaagtgata atgcgactcc caaccagtgc cagctggtgg ccttctggca agagatgatg
2701 ccattttcat gaattcctgg aatttctgtg cctcttttat gtgggaaagg gcaggctctg
2761 gtttctgctg cctcttctct tacattgtca tttatttctt cactgtgttg agctgggagg
2821 agtcttcaat gtgggaaggg attttctgcc aaatgccatt aatgctgctt tatccttagg
2881 ccctagagat actgaaagtc ctggggcagt atcttctgat ggtgtgcatg tgaggagaag
2941 atgaggttag gactgagaag tgcagaagtt ggaacagtgg taaggctgtt ttaaaataag
3001 atgttttgtt ttaataatat gctcctggca caaagctagg agtaaatgtg actccaaagg
3061 gagttcagtt aatctctgaa atgcacaaaa cctagctatt ttctccctct catcacagtc
3121 tgagtctggt ccattgctac cccaattctc tggggacata aaaccaggct ggaaagggac
3181 caggaagttt gaaatagtga catatcatcc actagtccca agggctaagg aatagtgagt
3241 ttattctgga aggaactggg aagcttagtc taattagtgc ctggggatga cctatgcaat
3301 cacaccgctt atgaccatcc tagagagggc cctgagcacc agcttgatct tagggatttc
3361 caaagtaacc tgctttttgc ctggataggg ttaaaataga cctttcttgc ctatccttgc
3421 cttaacctat ctgcctgagg ttggcctgag attgtgagtc aacgactttg ctatcttttc
3481 ctcagtgttg aactttcatt aagaaataaa gtcctagctt cttacagaga ggggtccaaa
3541 tggtgaatgc tcatcctgcc tggattcaag gaattagctc agagattggc ccctagcttt
3601 tctgcctttg tagggacagc aaaaggggaa aatttgctgc agaaaattcc aaaagattgc
3661 tgtagctctc acagggaagt ggtaaagatc agctaaacct gggttggggt gctttctgcc
3721 cagtgggtct tggcataagt agattaatcc tgctctttta agaaaaggca acttattcag
3781 gcagtctgga aagggggttc tcagaaaact cagtttcttt attccttctt ttctcccaac
3841 tactgttaat ggttatagag gtctttggac tctaaagacc aatgtttggc cactaactgg
3901 actaatatgt atctttctgt gatttcatca tagaggtctg ttttgtgagg gtttggggtg
3961 cagaaaactt tgattaaatc ttaatgggag gctgggtgac ctggattatc tacagtgagc
4021 agacttaaat ggaacagaag tttatgtgtc caaatgatgg aatcattaaa cctgagtgac
4081 ttgaaaaaaa aaaaaaaaaa aaaaaaaa
//