LOCUS BC078174 4676 bp mRNA linear HUM 08-FEB-2007
DEFINITION Homo sapiens AMME chromosomal region gene 1-like, mRNA (cDNA clone
MGC:88063 IMAGE:6012672), complete cds.
ACCESSION BC078174
VERSION BC078174.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4676)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4676)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: f Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42544150.
FEATURES Location/Qualifiers
source 1..4676
/db_xref="H-InvDB:HIT000265733"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88063 IMAGE:6012672"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4676
/gene="AMMECR1L"
/gene_synonym="MGC4268"
/db_xref="GeneID:83607"
/db_xref="HGNC:HGNC:28658"
CDS 262..1194
/gene="AMMECR1L"
/gene_synonym="MGC4268"
/codon_start=1
/product="AMMECR1L protein"
/protein_id="AAH78174.1"
/db_xref="GeneID:83607"
/db_xref="HGNC:HGNC:28658"
/translation="MGKRRCVPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGS
SSGPLQNHQHVDSSSGRENVSDLTLGPGNSPITRMNPASGALSPLPRPNGTANTTKNL
VVTAEMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWKTGRDKRLRGCIGTFSAM
NLHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIR
IEFINEKGVKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYR
SEKVTISYAEYIASRQHCFQNGTLHAPPLYNHYS"
BASE COUNT 1183 a 1058 c 1136 g 1299 t
ORIGIN
1 ggccagcttc tctcgggagc ccccacccag gcgcatggct ccatgaagca agaggaggag
61 gcagagcgcg agaggtcccg tccgccccag ccgcgtctgg gccaggagaa aaggtacagg
121 aagaaggaat ggaatcggaa ggaagaaaat tcattccaga gacaaaatag ctcccctcct
181 ctgttgtagc tgttcctctg gcaatacaaa ctttctgctt tcaggttctg cagcattcca
241 gaccttgagc actgaatcag gatgggaaaa agacgttgtg ttcctccact cgagcccaag
301 ttggcagcag gctgttgtgg ggtcaagaag cccaaattat ctggaagtgg aacgcacagt
361 cacgggaatc agtccacaac tgtccccggc tctagttcag gacctcttca aaaccaccag
421 catgtggaca gcagcagtgg acgggagaat gtgtcagact taactctggg acctggaaac
481 tctcccatca cacgaatgaa tcccgcatcg ggagcgctga gccctcttcc ccggcctaat
541 ggaactgcca acaccactaa gaatctggtg gtgactgcag agatgtgctg ctactgcttc
601 gacgtactct actgtcacct ctatggcttc ccacagccac gacttcctag attcaccaat
661 gacccctatc cgctctttgt gacgtggaag acagggcggg acaagcggct tcgtggctgc
721 attgggacct tctcagccat gaatcttcat tcaggactca gggaatacac gttaaccagt
781 gcacttaagg acagccgatt tccccccctg acccgagagg agctgcctaa acttttctgc
841 tctgtctccc tccttactaa ctttgaggat gccagtgatt acctggactg ggaggtaggg
901 gtccatggga ttcgaattga attcattaat gaaaaaggtg tcaaacgcac agccacatat
961 ttacctgagg ttgctaagga acaagactgg gatcagatcc agacaataga ctccttgctc
1021 aggaaaggtg gctttaaagc tccaattacc agtgaattca gaaaaacgat caaactcacc
1081 aggtaccgaa gtgagaaggt gacaatcagt tacgcagagt atattgcttc ccgacagcac
1141 tgtttccaga acggcactct tcatgccccg cccctctaca atcattactc ctgacacacg
1201 gctgcatgac cagtcccacc cccccgtggc caccaatggc tatgacatca ttggagcaga
1261 tgcctcctct tcctggtcca gttacttcta ttactgcacc attttatgat gctagcttcc
1321 gttgccaagt ctgcctcccg ctgactgagg gagggtaggg ttaccttgaa cgaaacagaa
1381 cttgaggggc ccaagcctta tctcagcctt tcctcaatat ggggttccgt tggattgggg
1441 ctcctccatg actagtggga attactgtgg gttcagaaga cccttgtctg gtatttgcca
1501 catggggtat tggccacacg ctggaagctg aaattgatga tccctgaagg ttgaacccac
1561 acacacccct gcagcctccc cagatgaagt aggtgtattc ccctggcagt ctgggcaacg
1621 gagaccaaga aacattttta ggttgtttta aattcctttt tttaaacttc cagtttattg
1681 cgtaccaaga gttgattaca acctccatgc ttcataagcg gacgccacgt tagggttgga
1741 cgtgggcacc acgagtcctt tgaggctcct ggacagagac ccacatcaag atcggaagcc
1801 ctttgggtgg cgttgcagat ctcattgctc agtaggccgt gaagattttc atcctcatcc
1861 cactctcagt tggattttct ggcactcttc ctgcattgag tctcctgatt actgaacaga
1921 gctccgtcat gtagcctgct gaggaatgga atggaatgga gatgcccaca ggaggtcctg
1981 atgtcatcac tgcacgcagg tgtgagagga gagacctctt ctgcaccgcc tggctacctc
2041 actcctctgc tggtagcagt gcctatagct ggacctaagt tctcagaagc gtagatgtgc
2101 aaacaagcga ttgagttggg ctttaggagg acacatcata ggagagaatc cagggtctgt
2161 aagctggttt tcttttcagg tgacatcctg aggggcctgt aagcagggga gctccttttt
2221 ctagtttgcc tgtagaggtg ggaagactgt tggtgtttct gtcctttaca ggacattagg
2281 aaacagttgt gtaattacac aaggtggacc tttatcttgc ctgacatgct gggaatcttc
2341 accccaccag ggcaaatttc caaatagctc attttattct aggtctttca aactttcatg
2401 tgacatattt ccctttccca ttgttgctga tttccaaatc gctgtcagca attttttcct
2461 ctctccttgc ctattcttca ctcatttggt ggcaaagttc atagaactag gggacttgga
2521 agatgctttg aaaatattgt tacaaaggca ctgctaaaat gattcacagg gagagtggcc
2581 agttggaaga aggatcctaa ggatgtgaca ctggttttca acaacatgct tagagaactc
2641 atgaagtgga ttgggtgtca acccagtgaa catgttttta tttaatttat tttttgaagt
2701 ttatgtggtg atggtgtggc tttccgaaat gggcaaatat tcagaagatc ttttgcattt
2761 tcttctgtca ggaatgggga aggggagtgg gggcacaatc tgagaaagga cacctgtgct
2821 gttctaggca tcgctggcaa gtttgtggga agggatgggc aagggtgagt gggtttgctc
2881 cacaccgtcc tgtgctgctc gagaggacct gggacgtgcg agggaaacgt gggtgacggt
2941 gcctaggctg cggcccttca ctgctgtgct gggttcctgc agcctgctac gtttcccttg
3001 gcaatgtaaa tgaagatgga ggggtcgttt cgtgatttcc tgctgctgag aataaatgtc
3061 ttgttaaaaa cgtggcaacg gttactctta ggtgccatgg atcgatgtca gggtggtcag
3121 ctctggacta agccacccac ctccaatttg tacaacagta ttgatacata gggctacact
3181 cattactgtt caagtgttct atgttaagag ttgtgtttaa tttctaaaga ttaaaaaaag
3241 caaaaaaatt ggtgctaaac cttcacccct gagcacgctc agtgagactg gtcatgcaag
3301 catttacagt gccatgctcc tcaagccgat tttttcttgt agaaatgttg ccctatttgt
3361 cttctccaat gtatggtatg ttattttatt ttattatttt attttatttt attttatttt
3421 atcgaggggg ggtacgatac ctgccattta agaaaatgaa tagaaaattt taaaacccga
3481 gaaatggggg aaaaaaaatc agtgcacaag aattgggctg gttaggccca gcaccacact
3541 gaagtgggct cagtggtttt tggagtgaag aagccttact ccctgcacat tccctcatgc
3601 tcccacacaa gtccagcaat ggaaatgctt gggttcctct tgctttgtca ggggactcag
3661 gagtcgacca agggaaacca tttggccccg tgaggaatgg gcattgtcag tatccgtcct
3721 gaacggggcc tagtcaggaa gcggtctaga agtgtacggt cacggtcgcc tcatgaaagt
3781 gtgtagcagg tggctctcag gaaaaatacc aagtctggat catccatgtg gcagctttgc
3841 atagggagag gatagctccg aactggaact gaactgcctt ctctgcacgc ttgaccaaag
3901 cagtgatgag ggcggccagt acctgcggtg tgcgtggtag gtttaaagaa aagggaatgt
3961 tttctgctga gtgtttcctt tgtccttggg ctgctcgagc tggacagtag gtaaccactg
4021 ttttcaagga ccagcccaat ttctctggct tggttcggag ttcgtttcat ccctagctgt
4081 gagtgccttt tggtctggaa agttggcttg tctcataata cccacagcta ggacattctc
4141 tctgtaatta tgaattgtcc ttgttttaca ttaaaagaga atgtctttga tcactagagt
4201 ctgtcggtgt tggattattt ccactgtgag attcttaaaa cttttttgct tcataataat
4261 aaaacaactc atgttagaga ccctttcaac atgaaaggtt tgtagttgag acattacata
4321 tattttattg tttataataa aaatcatcta tacaaaagaa gtcctgggtg ttaatatttt
4381 gcacaagatc tgttttccat gatgtgttga catctacaat ttcactaact gttgacgtta
4441 ttttctattg agattctgga gcctagggag ctatgtgttc tttttgttca tttcgttctt
4501 acttccctga agcaagagac tatatggcct tcagtgcaaa gacttcagac caattctttg
4561 tattacactt ggttgcctct tggctatata acttctgagt gcaaatcatt gaacacttta
4621 acgaagtatt gtagagaata aatcataatg gataaaaaaa aaaaaaaaaa aaaaaa
//