LOCUS BC078170 2338 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens wingless-type MMTV integration site family member 2,
mRNA (cDNA clone MGC:90326 IMAGE:5761421), complete cds.
ACCESSION BC078170
VERSION BC078170.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2338)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2338)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: d Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507926.
FEATURES Location/Qualifiers
source 1..2338
/db_xref="H-InvDB:HIT000265729"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:90326 IMAGE:5761421"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2338
/gene="WNT2"
/gene_synonym="IRP"
/db_xref="GeneID:7472"
/db_xref="HGNC:HGNC:12780"
/db_xref="MIM:147870"
CDS 287..1369
/gene="WNT2"
/gene_synonym="IRP"
/codon_start=1
/product="wingless-type MMTV integration site family
member 2"
/protein_id="AAH78170.1"
/db_xref="GeneID:7472"
/db_xref="HGNC:HGNC:12780"
/db_xref="MIM:147870"
/translation="MNAPLGGIWLWLPLLLTWLTPEVNSSWWYMRATGGSSRVMCDNV
PGLVSSQRQLCHRHPDVMRAISQGVAEWTAECQHQFRQHRWNCNTLDRDHSLFGRVLL
RSSRESAFVYAISSAGVVFAITRACSQGEVKSCSCDPKKMGSAKDSKGIFDWGGCSDN
IDYGIKFARAFVDAKERKGKDARALMNLHNNRAGRKAVKRFLKQECKCHGVSGSCTLR
TCWLAMADFRKTGDYLWRKYNGAIQVVMNQDGTGFTVANERFKKPTKNDLVYFENSPD
YCIRDREAGSLGTAGRVCNLTSRGMDSCEVMCCGRGYDTSHVTRMTKCGCKFHWCCAV
RCQDCLEALDVHTCKAPKNADWTTAT"
BASE COUNT 594 a 559 c 642 g 543 t
ORIGIN
1 ggcgcgcggg aggcgcgcag agctttcggg ctgcaggcgc tcgctgcgcc tggggaattg
61 ggctgtgggc gaggcggtcc gggctggcct ttatcgctcg ctgggcccat cgtttgaaac
121 tttatcagcg agtctcgcca ctcgtcgcag acgcgagcgg ggggcggggg cgcggcgagg
181 cgccggcggc cgtgacgagg cgctcccgga gctgagcgct tctgctctgg gcacgcatgg
241 cgcccgcaca cggagtctga cctgatgcag acgcaagggg gttaatatga acgcccctct
301 cggtggaatc tggctctggc tccctctgct cttgacctgg ctcacccccg aggtcaactc
361 ttcatggtgg tacatgagag ctacaggtgg ctcctccagg gtgatgtgcg ataatgtgcc
421 aggcctggtg agcagccagc ggcagctgtg tcaccgacat ccagatgtga tgcgtgccat
481 tagccagggc gtggccgagt ggacagcaga atgccagcac cagttccgcc agcaccgctg
541 gaattgcaac accctggaca gggatcacag cctttttggc agggtcctac tccgaagtag
601 tcgggaatct gcctttgttt atgccatctc ctcagctgga gttgtatttg ccatcaccag
661 ggcctgtagc caaggagaag taaaatcctg ttcctgtgat ccaaagaaga tgggaagcgc
721 caaggacagc aaaggcattt ttgattgggg tggctgcagt gataacattg actatgggat
781 caaatttgcc cgcgcatttg tggatgcaaa ggaaaggaaa ggaaaggatg ccagagccct
841 gatgaatctt cacaacaaca gagctggcag gaaggctgta aagcggttct tgaaacaaga
901 gtgcaagtgc cacggggtga gcggctcatg tactctcagg acatgctggc tggccatggc
961 cgacttcagg aaaacgggcg attatctctg gaggaagtac aatggggcca tccaggtggt
1021 catgaaccag gatggcacag gtttcactgt ggctaacgag aggtttaaga agccaacgaa
1081 aaatgacctc gtgtattttg agaattctcc agactactgt atcagggacc gagaggcagg
1141 ctccctgggt acagcaggcc gtgtgtgcaa cctgacttcc cggggcatgg acagctgtga
1201 agtcatgtgc tgtgggagag gctacgacac ctcccatgtc acccggatga ccaagtgtgg
1261 gtgtaagttc cactggtgct gcgccgtgcg ctgtcaggac tgcctggaag ctctggatgt
1321 gcacacatgc aaggccccca agaacgctga ctggacaacc gctacatgac cccagcaggc
1381 gtcaccatcc accttccctt ctacaaggac tccattggat ctgcaagaac actggacctt
1441 tgggttcttt ctggggggat atttcctaag gcatgtggcc tttatctcaa cggaagcccc
1501 ctcttcctcc ctgggggccc caggatgggg gggccacacg ctgcacctaa agcctaccct
1561 attctatcca tctcctggtg ttctgcagtc atctcccctc ctggcgagtt ctctttggaa
1621 atagcatgac aggctgttca gccgggaggg tggtgggccc agaccactgt ctccacccac
1681 cttgacgttt cttctttcta gagcagttgg ccaagcagaa aaaaaagtgt ctcaaaggag
1741 ctttctcaat gtcttcccac aaatggtccc aattaagaaa ttccatactt ctctcagatg
1801 ggaacagtaa agaaagcaga atcaactgcc cctgacttaa ctttaacttt tgaaaagacc
1861 aagacttttg tctgatcaag tggttttaca gctaccaccc ttaggggtaa ttggtaatta
1921 cctggagaag aatggctttc aatacccttt taagtttaaa atgtgtattt ttcaaggcat
1981 ttattgccat attaaaatct gatgtaacaa ggtggggacg tgtgtccttt ggtactatgg
2041 tgtgttgtat ctttgtaaga gcaaaagcct cagaaaggga ttgctttgca ttactgtccc
2101 cttgatataa aaaatcttta gggaatgaga gttccttctc acttagaatc cgaagggaat
2161 taaaaagaag atgaatggtc tggcaatatt ctgtaactat tgggtgaata tggtggaaaa
2221 taatttagtg gatggaatat cagaagtata tctgtacaga tcaagaaaaa aagggagaat
2281 aaaattccta tctcatatta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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