LOCUS BC077075 2611 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens activating transcription factor 6 beta, mRNA (cDNA
clone MGC:87823 IMAGE:5766821), complete cds.
ACCESSION BC077075
VERSION BC077075.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2611)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2611)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: d Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20631976.
FEATURES Location/Qualifiers
source 1..2611
/db_xref="H-InvDB:HIT000265678_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87823 IMAGE:5766821"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2611
/gene="ATF6B"
/gene_synonym="CREB-RP"
/gene_synonym="G13"
/db_xref="GeneID:1388"
/db_xref="HGNC:HGNC:2349"
/db_xref="MIM:600984"
CDS 7..2118
/gene="ATF6B"
/gene_synonym="CREB-RP"
/gene_synonym="G13"
/codon_start=1
/product="activating transcription factor 6 beta"
/protein_id="AAH77075.1"
/db_xref="GeneID:1388"
/db_xref="HGNC:HGNC:2349"
/db_xref="MIM:600984"
/translation="MAELMLLSEIADPTRFFTDNLLSPEDWGLQNSTLYSGLDEVAEE
QTQLFRCPEQDVPFDGSSLDVGMDVSPSEPPWELLPIFPDLQVKSEPSSPCSSSSLSS
ESSRLSTEPSSEALGVGEVLHVKTESLAPPLCLLGDDPTSSFETVQINVIPTSDDSSD
VQTKIEPVSPCSSVNSEASLLSADSSSQAFIGEEVLEVKTESLSPSGCLLWDVPAPSL
GAVQISMGPSLDGSSGKALPTRKPPLQPKPVVLTTVPMPSRAVPPSTTVLLQSLVQPP
PVSPVVLIQGAIRVQPEGPAPSLPRPERKSIVPAPMPGNSCPPEVDAKLLKRQQRMIK
NRESACQSRRKKKEYLQGLEARLQAVLADNQQLRRENAALRRRLEALLAENSELKLGS
GNRKVVCIMVFLLFIAFNFGPVSISEPPSAPISPRMNKGEPQPRRHLLGFSEQEPVQG
VEPLQGSSQGPKEPQPSPTDQPSFSNLTAFPGGAKELLLRDLDQLFLSSDCRHFNRTE
SLRLADELSGWVQRHQRGRRKIPQRAQERQKSQPRKKSPPVKAVPIQPPGPPERDSVG
QLQLYRHPDRSQPAFLDAIDRREDTFYVVSFRRDHLLLPAISHNKTSRPKMSLVMPAM
APNETLSGRGAPGDYEEMMQIECEVMDTRVIHIKISTVPPSLRKQPSPTPGNATGGPL
PVSAASQAHQASHQPLYLNHP"
BASE COUNT 565 a 784 c 700 g 562 t
ORIGIN
1 ggaaagatgg cggagctgat gctgctcagc gagattgctg acccgacgcg tttcttcacc
61 gacaacctgc ttagcccgga ggactggggt ctgcagaaca gcaccttgta ttctggccta
121 gatgaagtgg ccgaggagca gacgcagctc ttccgttgcc cggagcagga tgtcccgttt
181 gacggcagct ccctggacgt ggggatggat gtcagcccct ctgagccccc atgggaactc
241 ctgccgatct tcccagatct tcaggtgaag tctgagccat cttccccctg ctcttcctcc
301 tccctcagct ccgagtcatc gcgtctctcc acagagccat ccagcgaggc tcttggggta
361 ggggaggtgc tccatgtgaa gacagagtcc ttggcacccc cactgtgtct cctgggagat
421 gacccaacat cctcatttga aaccgtccag atcaacgtta tccccacctc tgatgattcc
481 tcagatgtcc agaccaagat agaacctgtc tctccatgtt cttccgtcaa ctctgaggcc
541 tccctgctct cagccgactc ctccagccag gcttttatag gagaggaggt cctggaagtg
601 aagacagagt ccctgtcccc ttcaggatgc ctcctgtggg atgtcccagc cccctcactt
661 ggagctgtcc agatcagcat gggcccatcc cttgatggct cctcaggcaa agccctgccc
721 acccggaagc cgccactgca gcccaaacct gtagtgctaa ccactgtccc aatgccatcc
781 agagctgtgc ctcccagcac cacagtcctt ctgcagtccc tcgtccagcc acccccagtg
841 tccccagttg tcctcatcca gggtgctatt cgagtccagc ctgaagggcc ggctccctct
901 ctaccacggc ctgagaggaa gagcatcgtt cccgctccta tgcctggaaa ctcctgcccg
961 cctgaagtgg atgcaaagct gctgaagcgg cagcagcgaa tgatcaagaa ccgggagtca
1021 gcctgccagt cccggagaaa gaagaaagag tatctgcagg gactggaggc tcggctgcaa
1081 gcagtactgg ctgacaacca gcagctccgc cgagagaatg ctgccctccg gcggcggctg
1141 gaggccctgc tggctgaaaa cagcgagctc aagttagggt ctggaaacag gaaggtggtc
1201 tgcatcatgg tcttccttct cttcattgcc ttcaactttg gacctgtcag catcagtgag
1261 cctccttcag ctcccatctc tcctcggatg aacaaggggg agcctcaacc ccggagacac
1321 ttgctggggt tctcagagca agagccagtt cagggagttg aacctctcca ggggtcctcc
1381 cagggcccta aggagcccca gcccagcccc acagaccagc ccagtttcag caacctgaca
1441 gccttccctg ggggcgccaa ggagctacta ctaagagacc tagaccagct cttcctctcc
1501 tctgattgcc ggcacttcaa ccgcactgag tccctgaggc ttgctgacga gttgagtggc
1561 tgggtccagc gccaccagag aggccggagg aagatccctc agagggccca ggagagacag
1621 aagtctcagc cacggaagaa gtcacctcca gttaaggcag tccccatcca accccctgga
1681 cccccagaaa gggattctgt gggccagctg caactatatc gccacccaga ccgttcgcag
1741 ccagcattct tggatgcaat tgaccgacgg gaagacacat tttatgttgt ctctttccga
1801 agggaccacc tgctgctccc agccatcagc cacaacaaga cctcccggcc caagatgtcc
1861 ctggtgatgc ctgccatggc ccccaatgag accctgtcag gccgtggggc cccgggggac
1921 tatgaggaga tgatgcagat cgagtgtgag gtcatggaca ccagggtgat tcacatcaag
1981 atctccacag tgcccccctc gctccgaaaa cagccatccc caaccccagg caatgccaca
2041 ggtggcccct tgccagtctc tgcagccagc caggcccacc aggcctccca ccagcccctc
2101 tacctcaatc atccctgacc tctgccattc acactgactt agaacggggg gagggggtac
2161 caggtggcca ggtgggactg tttcaaattt ccctgatccc caggcttggg gcaattggta
2221 aaggaaagag caggtgtggg ggttaagcac ttatttgagg tgggggtgtt cacctctctt
2281 ctcatccctt ttcagaatat agggctcctc tcattcctgt gaacccccag tcctggcttc
2341 tttgtttgag gggattgtgt gaggttcagt tgtggggtgg gtggtgagct gctgcatatt
2401 ttttattttg tttctctagt gttatggcag tggaggtggg aatttagtcc ccaggtggga
2461 caagggaagt tttttcattt tggagctagt tactgggagt aagggagggt ggggtggggg
2521 ggagttcagg tttatgtgtg tgcatttctt ttttattatt attaaataaa caacttggag
2581 ggaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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