LOCUS BC075838 4124 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens laminin, beta 3, mRNA (cDNA clone MGC:88729
IMAGE:6291096), complete cds.
ACCESSION BC075838
VERSION BC075838.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4124)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4124)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62868214.
FEATURES Location/Qualifiers
source 1..4124
/db_xref="H-InvDB:HIT000265652"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88729 IMAGE:6291096"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4124
/gene="LAMB3"
/db_xref="GeneID:3914"
/db_xref="HGNC:HGNC:6490"
/db_xref="MIM:150310"
CDS 176..3694
/gene="LAMB3"
/codon_start=1
/product="laminin, beta 3"
/protein_id="AAH75838.1"
/db_xref="GeneID:3914"
/db_xref="HGNC:HGNC:6490"
/db_xref="MIM:150310"
/translation="MRPFFLLCFALPGLLHAQQACSRGACYPPVGDLLVGRTRFLRAS
STCGLTKPETYCTQYGEWQMKCCKCDSRQPHNYYSHRVENVASSSGPMRWWQSQNDVN
PVSLQLDLDRRFQLQEVMMEFQGPMPAGMLIERSSDFGKTWRVYQYLAADCTSTFPRV
RQGRPQSWQDVRCQSLPQRPNARLNGGKVQLNLMDLVSGIPATQSQKIQEVGEITNLR
VNFTRLAPVPQRGYHPPSAYYAVSQLRLQGSCFCHGHADRCAPKPGASAGPSTAVQVH
DVCVCQHNTAGPNCERCAPFYNNRPWRPAEGQDAHECQRCDCNGHSETCHFDPAVFAA
SQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCISCECDPDGAVPGAPC
DPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDMPCDEESGR
CLCLPNVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSLSPQCNQFTGQCPCREGFGG
LMCSAAAIRQCPDRTYGDVATGCRACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCDQ
CQRGYCNRYPVCVACHPCFQTYDADLREQALRFGRLRNATASLWSGPGLEDRGLASRI
LDAKSKIEQIRAVLSSPAVTEQEVAQVASAILSLRRTLQGLQLDLPLEEETLSLPRDL
ESLDRSFNGLLTMYQRKREQFEKISSADPSGAFRMLSTAYEQSAQAAQQVSDSSRLLD
QLRDSRREAERLVRQAGGGGGTGSPKLVALRLEMSSLPDLTPTFNKLCGNSRQMACTP
ISCPGELCPQDNGTACGSRCRGVLPRAGGAFLMAGQVAEQLRGFNAQLQRTRQMIRAA
EESASQIQSSAQRLETQVSASRSQMEEDVRRTRLLIQQVRDFLTDPDTDAATIQEVSE
AVLALWLPTDSATVLQKMNEIQAIAARLPNVDLVLSQTKQDIARARRLQAEAEEARSR
AHAVEGQVEDVVGNLRQGTVALQEAQDTMQGTSRSLRLIQDRVAEVQQVLRPAEKLVT
SMTKQLGDFWTRMEELRHQARQQGAEAVQAQQLAEGASEQALSAQEGFERIKQKYAEL
KDRLGQSSMLGEQGARIQSVKTEAEELFGETMEMMDRMKDMELELLRGSQAIMLRSAD
LTGLEKRVEQIRDHINGRVLYYATCK"
BASE COUNT 915 a 1164 c 1260 g 785 t
ORIGIN
1 gctgctccaa gtgtcctaga tcaggaccct aggtaaagac ttctgaaaaa tacttgagtc
61 tagaaacaga aaagaaaaag ggctagtgtg ctctaggggt ttgcactgtt gtacccagtt
121 tgctttgctg tgtcctagga aaggtccttt ctggggatca ccccattggc tgaagatgag
181 accattcttc ctcttgtgtt ttgccctgcc tggcctcctg catgcccaac aagcctgctc
241 ccgtggggcc tgctatccac ctgttgggga cctgcttgtt gggaggaccc ggtttctccg
301 agcttcatct acctgtggac tgaccaagcc tgagacctac tgcacccagt atggcgagtg
361 gcagatgaaa tgctgcaagt gtgactccag gcagcctcac aactactaca gtcaccgagt
421 agagaatgtg gcttcatcct ccggccccat gcgctggtgg cagtcccaga atgatgtgaa
481 ccctgtctct ctgcagctgg acctggacag gagattccag cttcaagaag tcatgatgga
541 gttccagggg cccatgcctg ccggcatgct gattgagcgc tcctcagact tcggtaagac
601 ctggcgagtg taccagtacc tggctgccga ctgcacctcc accttccctc gggtccgcca
661 gggtcggcct cagagctggc aggatgttcg gtgccagtcc ctgcctcaga ggcctaatgc
721 acgcctaaat ggggggaagg tccaacttaa ccttatggat ttagtgtctg ggattccagc
781 aactcaaagt caaaaaattc aagaggtggg ggagatcaca aacttgagag tcaatttcac
841 caggctggcc cctgtgcccc aaaggggcta ccaccctccc agcgcctact atgctgtgtc
901 ccagctccgt ctgcagggga gctgcttctg tcacggccat gctgatcgct gcgcacccaa
961 gcctggggcc tctgcaggcc cctccaccgc tgtgcaggtc cacgatgtct gtgtctgcca
1021 gcacaacact gccggcccaa attgtgagcg ctgtgcaccc ttctacaaca accggccctg
1081 gagaccggcg gagggccagg acgcccatga atgccaaagg tgcgactgca atgggcactc
1141 agagacatgt cactttgacc ccgctgtgtt tgccgccagc cagggggcat atggaggtgt
1201 gtgtgacaat tgccgggacc acaccgaagg caagaactgt gagcggtgtc agctgcacta
1261 tttccggaac cggcgcccgg gagcttccat tcaggagacc tgcatctcct gcgagtgtga
1321 tccggatggg gcagtgccag gggctccctg tgacccagtg accgggcagt gtgtgtgcaa
1381 ggagcatgtg cagggagagc gctgtgacct atgcaagccg ggcttcactg gactcaccta
1441 cgccaacccg cagggctgcc accgctgtga ctgcaacatc ctggggtccc ggagggacat
1501 gccgtgtgac gaggagagtg ggcgctgcct ttgtctgccc aacgtggtgg gtcccaaatg
1561 tgaccagtgt gctccctacc actggaagct ggccagtggc cagggctgtg aaccgtgtgc
1621 ctgcgacccg cacaactccc tcagcccaca gtgcaaccag ttcacagggc agtgcccctg
1681 tcgggaaggc tttggtggcc tgatgtgcag cgctgcagcc atccgccagt gtccagaccg
1741 gacctatgga gacgtggcca caggatgccg agcctgtgac tgtgatttcc ggggaacaga
1801 gggcccgggc tgcgacaagg catcaggccg ctgcctctgc cgccctggct tgaccgggcc
1861 ccgctgtgac cagtgccagc gaggctactg caatcgctac ccggtgtgcg tggcctgcca
1921 cccttgcttc cagacctatg atgcggacct ccgggagcag gccctgcgct ttggtagact
1981 ccgcaatgcc accgccagcc tgtggtcagg gcctgggctg gaggaccgtg gcctggcctc
2041 ccggatccta gatgcaaaga gtaagattga gcagatccga gcagttctca gcagccccgc
2101 agtcacagag caggaggtgg ctcaggtggc cagtgccatc ctctccctca ggcgaactct
2161 ccagggcctg cagctggatc tgcccctgga ggaggagacg ttgtcccttc cgagagacct
2221 ggagagtctt gacagaagct tcaatggtct ccttactatg tatcagagga agagggagca
2281 gtttgaaaaa ataagcagtg ctgatccttc aggagccttc cggatgctga gcacagccta
2341 cgagcagtca gcccaggctg ctcagcaggt ctccgacagc tcgcgccttt tggaccagct
2401 cagggacagc cggagagagg cagagaggct ggtgcggcag gcgggaggag gaggaggcac
2461 cggcagcccc aagcttgtgg ccctgaggct ggagatgtct tcgttgcctg acctgacacc
2521 caccttcaac aagctctgtg gcaactccag gcagatggct tgcaccccaa tatcatgccc
2581 tggtgagcta tgtccccaag acaatggcac agcctgtggc tcccgctgca ggggtgtcct
2641 tcccagggcc ggtggggcct tcttgatggc ggggcaggtg gctgagcagc tgcggggctt
2701 caatgcccag ctccagcgga ccaggcagat gattagggca gccgaggaat ctgcctcaca
2761 gattcaatcc agtgcccagc gcttggagac ccaggtgagc gccagccgct cccagatgga
2821 ggaagatgtc agacgcacac ggctcctaat ccagcaggtc cgggacttcc taacagaccc
2881 cgacactgat gcagccacta tccaggaggt cagcgaggcc gtgctggccc tgtggctgcc
2941 cacagactca gctactgttc tgcagaagat gaatgagatc caggccattg cagccaggct
3001 ccccaacgtg gacttggtgc tgtcccagac caagcaggac attgcgcgtg cccgccggtt
3061 gcaggctgag gctgaggaag ccaggagccg agcccatgca gtggagggcc aggtggaaga
3121 tgtggttggg aacctgcggc aggggacagt ggcactgcag gaagctcagg acaccatgca
3181 aggcaccagc cgctcccttc ggcttatcca ggacagggtt gctgaggttc agcaggtact
3241 gcggccagca gaaaagctgg tgacaagcat gaccaagcag ctgggtgact tctggacacg
3301 gatggaggag ctccgccacc aagcccggca gcagggggca gaggcagtcc aggcccagca
3361 gcttgcggaa ggtgccagcg agcaggcatt gagtgcccaa gagggatttg agagaataaa
3421 acaaaagtat gctgagttga aggaccggtt gggtcagagt tccatgctgg gtgagcaggg
3481 tgcccggatc cagagtgtga agacagaggc agaggagctg tttggggaga ccatggagat
3541 gatggacagg atgaaagaca tggagttgga gctgctgcgg ggcagccagg ccatcatgct
3601 gcgctcggcg gacctgacag gactggagaa gcgtgtggag cagatccgtg accacatcaa
3661 tgggcgcgtg ctctactatg ccacctgcaa gtgatgctac agcttccagc ccgttgcccc
3721 actcatctgc cgcctttgct tttggttggg ggcagattgg gttggaatgc tttccatctc
3781 caggagactt tcatgcagcc taaagtacag cctggaccac ccctggtgtg tagctagtaa
3841 gattaccctg agctgcagct gagcctgagc caatgggaca gttacacttg acagacaaag
3901 atggtggaga ttggcatgcc attgaaacta agagctctca agtcaaggaa gctgggctgg
3961 gcagtatccc ccgcctttag ttctccactg gggaggaatc ctggaccaag cacaaaaact
4021 taacaaaagt gatgtaaaaa tgaaaagcca aataaaaatc tttggaaaag agcctggagg
4081 ttcaacgagg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//