LOCUS BC075837 1306 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA
(cDNA clone MGC:88719 IMAGE:6272425), complete cds.
ACCESSION BC075837
VERSION BC075837.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1306)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1306)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: j Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50233912.
FEATURES Location/Qualifiers
source 1..1306
/db_xref="H-InvDB:HIT000265651"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88719 IMAGE:6272425"
/tissue_type="Salivary gland, epidermoid carcinoma"
/clone_lib="NIH_MGC_102"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1306
/gene="HMGN2"
/gene_synonym="MGC5629"
/db_xref="GeneID:3151"
/db_xref="HGNC:HGNC:4986"
/db_xref="MIM:163910"
CDS 191..463
/gene="HMGN2"
/gene_synonym="MGC5629"
/codon_start=1
/product="high-mobility group nucleosomal binding domain
2"
/protein_id="AAH75837.1"
/db_xref="GeneID:3151"
/db_xref="HGNC:HGNC:4986"
/db_xref="MIM:163910"
/translation="MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKA
PAKKGEKVPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGDAK"
BASE COUNT 378 a 282 c 308 g 338 t
ORIGIN
1 gaacggcggc gggaggtgaa atccggttct aaccggtccg gggctcccag cgctataaaa
61 actttataaa ccccccggag cccgagcagt gtgaagaaga ggcgagaacg acccccggac
121 cgaccaaagc ccgcgcgccg ctgcatcccg cgtccagcac ctacgtcccg ctgccgtcgc
181 cgccgccacc atgcccaaga gaaaggctga aggggatgct aagggagata aagcaaaggt
241 gaaggacgaa ccacagagaa gatccgcgag gttgtctgct aaacctgctc ctccaaagcc
301 agagcccaag cctaaaaagg cccctgcaaa gaagggagag aaggtaccca aagggaaaaa
361 gggaaaagct gatgctggca aggaggggaa taaccctgca gaaaatggag atgccaaaac
421 agaccaggca cagaaagctg aaggtgctgg agatgccaag tgaagtgtgt gcatttttga
481 taactgtgta cttctggtga ctgtacagtt tgaaatacta ttttttatca agttttataa
541 aaatgcagaa ttttgtttta cttttttttt ttttaaaagc tatgttgtta gcacacagaa
601 cacttcattg ttgtttttgg gggaaggggc atatgtcact aatagaatgt ctccaaagct
661 ggattgatgt ggagaaaaca cctttccctt ctagttttga gagacttcct cttggctccc
721 aggaggaggg attccctgac tttgacacac atggccacct tggcacaaaa gccttgtggt
781 atagaaaaac aaatttgttt ttatgtcctc ttctcccttt ccatctttca gcatagactt
841 aactccctta agcccagaca tctgttgaga cctgacccct agtcattggt taccagtgtg
901 tcaggcaatc tggactttcc agtgatgcca ctgagatggc acctgtcaaa agagcagtgg
961 ttccatttct agattgtgga tcttcagata aattctgcca ttttcatttc acttcctgaa
1021 agtcagggtc ggcttgtgaa aagttgttaa acaacatgct aaatgtgaaa tgtcaaccct
1081 cactctaaac tttccctgtt cagagcatca gatgaagact tcattgggtt ttatagtggc
1141 tttctgattt ttggtagtcc attgaagaag ggagtttgaa agttgttgta tactgttaac
1201 gattgtctgc ccatgtcctg cctgaaatac catgattgtt tatggaaagt atctttaata
1261 aagctggata cagtttggct tggaaaaaaa aaaaaaaaaa aaaaaa
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