LOCUS BC075799 2850 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens Rho GTPase activating protein 5, mRNA (cDNA clone
IMAGE:5286523), complete cds.
ACCESSION BC075799
VERSION BC075799.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2850)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2850)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: b Column: 16
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2850
/db_xref="H-InvDB:HIT000265614"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5286523"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2850
/gene="ARHGAP5"
/gene_synonym="p190-B"
/gene_synonym="RhoGAP5"
/db_xref="GeneID:394"
/db_xref="MIM:602680"
CDS 293..1006
/gene="ARHGAP5"
/gene_synonym="p190-B"
/gene_synonym="RhoGAP5"
/codon_start=1
/product="ARHGAP5 protein"
/protein_id="AAH75799.1"
/db_xref="GeneID:394"
/db_xref="MIM:602680"
/translation="MSLPPPPPGPLPLRRRRRRPTLLGLCTEGLYRVSGNKTDQDNIQ
KQFDQDHNINLVSMEVTVNAVAGALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERL
HALKEIVKKFHPVNYDVFRYVITHLNRVSQQHKINLMTADNLSICFWPTLMRPDFENR
EFLSTTKIHQSVVETFIQQCQFFFYNGEIVETTNIVAPPPPSNPGQLVEPMVPLQLPP
PLQPQLIQPQLQTDPLGII"
BASE COUNT 882 a 490 c 581 g 897 t
ORIGIN
1 agggaaatcc gtcagcgcga gggagcccga gtggccgcca ttactgagcc cggcgcggcg
61 gcgggcgctg gggaaggggg gagggacggg ccgccgctgg tggcggggag ggagggaggg
121 agggtgggtg agctggctgc gggagccgtg gggctcaggg tttcggggcg tgtgtgtcgg
181 ggagggcggg gggaggtggc tgaagggacg cgccgctcgg tgagcgcgcc gaggaagaga
241 ggcgagcgga gagtggagga ggaggcggcg gcggcgggag cggtccccag gaatgtcgct
301 gccgccgcca ccgccggggc cgctgccgtt gaggaggaga cggaggagac cgacgttgtt
361 agggttatgt accgaaggac tctaccgtgt cagcgggaat aaaactgacc aagacaatat
421 tcaaaagcag tttgatcaag atcataatat caatctagtg tcaatggaag taacagtaaa
481 tgctgtagct ggagccctta aagctttctt tgcagatctg ccagatcctt taattccata
541 ttctcttcat ccagaactat tggaagcagc aaaaatcccg gataaaacag aacgtcttca
601 tgccttgaaa gaaattgtta agaaatttca tcctgtaaac tatgatgtat tcagatacgt
661 gataacacat ctaaacaggg ttagtcagca acataaaatc aacctaatga cagcagacaa
721 cttatccatc tgtttttggc caaccttgat gagacctgat tttgaaaatc gagagtttct
781 gtctactact aagattcatc aatctgttgt tgaaacattc attcagcagt gtcagttttt
841 cttttacaat ggagaaattg tagaaacgac aaacattgtg gctcctccac caccttcaaa
901 cccaggacag ttggtggaac caatggtgcc acttcagttg ccgccaccat tgcaacctca
961 gctgatacaa ccacaattac aaacggatcc tcttggtatt atatgagtag gaagtgattg
1021 caaacaggct ggatttggac aaaaagcaaa tctagacatg catgtttcag ggttcagtag
1081 tatacttcat gtttcataca gataattcac attcaaaatt acattttctc tttgaactag
1141 atggtattcc ttattcactt acattacaaa tctaagacca tgtgataagc atgactggag
1201 aggtttaatt tttataaaca aaaatagcta taaagtacaa agctgctgct gcatgcaacc
1261 ttattgcaat cagtatatca ttcctgtggc aatttctgtc accttatatt gtgaataaaa
1321 tttttctata gaaattaaat gatttaaaaa ctcacctata tgaaacattt aatgcttttc
1381 agcctgcttt ctggctgatt ttgttatttg atgtgctaat ttgggcaact taatttacat
1441 tctggcagtc ggtgtagata actaaaagcc cagttaagta ttttataatt tcaggctact
1501 gaggccatgc ttgggatgtt gtttgaaaga aagaaaaaat acacttgaca tatttcacat
1561 ttctgtacct tcatctttac ttccaagtaa acccgtggat gatttgatga gggataaatg
1621 aacctatttc ttttacacac ataccaagga catgcttgtg gctaaagtga gttgataatg
1681 ttgtgcatag gatagttgtc accaactcat ttctttatgg tccataatga aataaaaatt
1741 ttgtatactg ttaattctgt aaacagatgc atgttcaaaa gatctatgat ggtcttgtaa
1801 tcttaatcta atatatttta gatattttaa ttttttccct cttggggaac acatttagta
1861 tagtgtagaa aatacttcca tgacattttc atataaggtt atataacttt tcatacataa
1921 acatgaaatt tgttgtagaa aattctttaa accaaacatt taaatctagg acttcaattt
1981 aatttgttcc ttgaatctat ttttatgtgg cccttaaaaa atatccaaaa aacccattgc
2041 taatatagca ataaaaatac tttgggtact gacagactct ttggagtgtt tatattacaa
2101 atttgtattc atattctttt ctgtgatgtg ttgtactaaa atccaaaatg gcttttgcac
2161 catttttaag ccaatttttt cctttgatgt tggtaccaga attactataa gtgactgctg
2221 cttttggggg taaacatttt gttagtgaag ataaaaccag aacactaaat tatggataaa
2281 attttcagaa taggtggcac aggtaaattt cactaggtta tattttgtgt agtaaagaaa
2341 aaaattattt ggtcaatgtt atcttaattc atactacaat ttaagattat cttatgtgta
2401 ttatagtaaa tagatgattt tcagattcaa ggctcctaag agtttgattt gctctgtttt
2461 ttcctaaaat aaatattgtc tctcccaact gttaagttct aggtattgta cttccaattt
2521 taacttcaga accaagatgt tggcatgaac caggctgctg ttgaagtaca tgtatattat
2581 aaattatctt atttgtgtta tactcttaca tgttatcttt tctaagaaaa caaagtccct
2641 attattccta ttgcaaagca cacaggaatt aagaaagtac agtaattttt aaaaaaaaat
2701 ccggtaaatg tagtattctt aacctgttct atattactta tacctattgt ctatatagct
2761 ttaatttata gttgtcagtt taactattgg catgtctggc aaagaaaatt aaactttaag
2821 agttttataa acaaaaaaaa aaaaaaaaaa
//