LOCUS BC075791 2453 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens homeobox A13, mRNA (cDNA clone MGC:86983
IMAGE:30341785), complete cds.
ACCESSION BC075791
VERSION BC075791.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2453)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2453)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: l Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24497553.
FEATURES Location/Qualifiers
source 1..2453
/db_xref="H-InvDB:HIT000265606"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:86983 IMAGE:30341785"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2453
/gene="HOXA13"
/db_xref="GeneID:3209"
/db_xref="HGNC:HGNC:5102"
/db_xref="MIM:142959"
CDS 30..1196
/gene="HOXA13"
/codon_start=1
/product="homeobox A13"
/protein_id="AAH75791.1"
/db_xref="GeneID:3209"
/db_xref="HGNC:HGNC:5102"
/db_xref="MIM:142959"
/translation="MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEGAAAAAAA
AAAAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPVAA
SAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAA
QSSSGPAALPYGYFGSGYYPCARMGPHPNAIKSCAQPASAAAAAAFADKYMDTAGPAA
EEFSSRAKEFAFYHQGYAAGPYHHHQPMPGYLDMPVVPGLGGPGESRHEPLGLPMESY
QPWALPNGWNGQMYCPKEQAQPPHLWKSTLPDVVSHPSDASSYRRGRKKRVPYTKVQL
KELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKKVINKLKTTS"
BASE COUNT 613 a 648 c 605 g 587 t
ORIGIN
1 actggggtct tctccatgcg gctcgggcta tgacagcctc cgtgctcctc cacccccgct
61 ggatcgagcc caccgtcatg tttctctacg acaacggcgg cggcctggtg gccgacgagc
121 tcaacaagaa catggaaggg gcggcggcgg ctgcagcagc ggctgcagcg gcggcggctg
181 ccggggccgg gggcgggggc ttcccccacc cggcggctgc ggcggcaggg ggcaacttct
241 cggtggcggc ggcggccgcg gctgcggcgg cggccgcggc caaccagtgc cgcaacctga
301 tggcgcaccc ggcgcccttg gcgccagtag ccgcgtccgc ctacagcagc gcccccgggg
361 aggcgccccc gtcggctgcc gccgctgctg ccgcggctgc cgctgcagcc gccgccgccg
421 ccgccgcgtc gtcctcggga ggtcccggcc cggcgggccc ggcgggcgca gaggccgcca
481 agcaatgcag cccctgctcg gcagcggcgc agagctcgtc ggggcccgcg gcgctgccct
541 atggctactt cggcagcggc tactacccgt gcgcccgcat gggcccgcac cccaacgcca
601 tcaagtcgtg cgcgcagccc gcctcggccg ccgccgccgc cgccttcgcg gacaagtaca
661 tggataccgc cggcccagct gccgaggagt tcagctcccg cgctaaggag ttcgccttct
721 accaccaggg ctacgcagcc gggccttacc accaccatca gcccatgcct ggctacctgg
781 atatgccagt ggtgccgggc ctcgggggcc ccggcgagtc gcgccacgaa cccttgggtc
841 ttcccatgga aagctaccag ccctgggcgc tgcccaacgg ctggaacggc caaatgtact
901 gccccaaaga gcaggcgcag cctccccacc tctggaagtc cactctgccc gacgtggtct
961 cccatccctc ggatgccagc tcctatagga gggggagaaa gaagcgcgtg ccttatacca
1021 aggtgcaatt aaaagaactt gaacgggaat acgccacgaa taaattcatt actaaggaca
1081 aacggaggcg gatatcagcc acgacgaatc tctctgagcg gcaggtcaca atctggttcc
1141 agaacaggag ggttaaagag aaaaaagtca tcaacaaact gaaaaccact agttaatgga
1201 ttaaaaatag agcaagaagg caacttgaag aaacgcttca gaactcgttg ctttgcccag
1261 ataatgataa taatgcttaa taataattga agaatgggaa agagaaagag acagagactg
1321 gcattttcct ctcccgaagg agatctcttt ctctttaatg gaatctacaa ctgttttaaa
1381 actttaagaa aggtaaagac tgccagttct tccgccaacc ccatcagccc agcccgttaa
1441 atgtcaaacg tcaaccccca aaatacgcaa tttcagataa gttacgcagt tactgaaatc
1501 ttgtaagtat ttaagtgatc gttacatttt aggacactgc gttagatggt aataatctgg
1561 aagttggtta caaacgcaag aggccattgt aaacatctgc ttgtccttct taggtcgcca
1621 ttccctttgc atgttaagcg tctgctcagg taaatcttag tgaaattcct accgttgttg
1681 tacgttctgc aaaacatttt atgtatagat ttagagggga aacgagaagg tactgaaata
1741 atgatcttgg aatatttgct gtgaagggag aaagggagag aaaactcttc tgaggatcat
1801 ttgtcttggt agtatagtaa aaccaaccag ctgaaccttt caggctacaa gagaacccgg
1861 gtcggtaatg tctttttaag aataattttt aattgcttat aacaagcata ttttgtggca
1921 tttgaactat atttactgct ccaatatccg ttattttcca aaggattttg tatctttttg
1981 aaaatgttta catcatcaga tgatccacag aattcacttt atgtgagatc tcccgagagt
2041 ttccatccca acataatgga ctttggtttg aacacaattc gttttttcat ttgaattggc
2101 atttcccaat atttgctaaa catttgctgg agaaatcatt tttctttttt cttttttaga
2161 aaactcagaa tgaaaattca ttcccctgaa atatttaggt gtctatattc tatattttga
2221 tctattaagg gattagtatt tttccatgtt tattgtgtta tcagagtgca ttagaaagat
2281 tagtgattca tcttcacagc acatttttaa tcaagcagtt atttcaacca gcacattcgt
2341 tttgttcata ttcactatag aatgatatct tgtaaataag gacattcagc acactgtgaa
2401 aatgtatttg tgcacctgct ttttaaatat ttctaccaaa aaaaaaaaaa aaa
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