LOCUS BC073889 1712 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens lectin, galactoside-binding, soluble, 9C, mRNA (cDNA
clone MGC:90361 IMAGE:5222492), complete cds.
ACCESSION BC073889
VERSION BC073889.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1712)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1712)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: l Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6806889.
FEATURES Location/Qualifiers
source 1..1712
/db_xref="H-InvDB:HIT000265113"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:90361 IMAGE:5222492"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1712
/gene="LGALS9C"
/db_xref="GeneID:654346"
/db_xref="HGNC:HGNC:33874"
CDS 40..1110
/gene="LGALS9C"
/codon_start=1
/product="lectin, galactoside-binding, soluble, 9C"
/protein_id="AAH73889.1"
/db_xref="GeneID:654346"
/db_xref="HGNC:HGNC:33874"
/translation="MAFSGCQAPYLSPAVPFSGTIQGGLQDGFQITVNGAVLSCSGTR
FAVDFQTGFSGNDIAFHFNPRFEDGGYVVCNTRQKGTWGPEERKMHMPFQKGMPFDLC
FLVQSSDFKVMVNGSLFVQYFHRVPFHRVDTISVNGSVQLSYISFQNPRAVPVQPAFS
TVPFSQPVCFPPRPRGRRQKPPIVRPANPAPITQTVIHTVQSASGQMFSQTPAIPPMM
YPHPAYPMPFITTIPGGLYPSKSIILSGTVLPSAQRFHINLCSGSHIAFHMNPRFDEN
AVVRNTQINNSWGSEERSLPRKMPFVRGQSFSVWILCEAHCLKVAVDGQHVFEYYHRL
RNLPTINKLEVGGDIQLTHVQT"
BASE COUNT 359 a 549 c 442 g 362 t
ORIGIN
1 ggtgtcaaag gcagtggtgg ccacagaggc ggtggagaga tggccttcag cggttgccag
61 gctccctatc tgagcccagc cgtccccttt tctgggacta tccaaggggg tctccaggac
121 ggatttcaga tcactgtcaa tggggccgtt ctcagctgca gtggaaccag gtttgctgtg
181 gactttcaga cgggcttcag tggaaacgac attgccttcc acttcaaccc tcggtttgaa
241 gacggagggt atgtggtgtg caacacgagg cagaaaggaa catgggggcc cgaggagagg
301 aagatgcaca tgcccttcca gaaggggatg ccctttgacc tctgcttcct ggtgcagagc
361 tcagatttca aggtgatggt gaacgggagc ctcttcgtgc agtacttcca ccgcgtgccc
421 ttccaccgtg tggacaccat ctccgtcaat ggctctgtgc agctgtccta catcagcttc
481 cagaatcccc gcgcagtccc cgttcagcct gccttctcca cggtgccgtt ctcccagcct
541 gtctgtttcc cacccaggcc cagggggcgc agacaaaaac ctcccatcgt gcggcctgcc
601 aacccagctc ccattaccca gacagtcatc cacacggtgc agagtgcctc tggacagatg
661 ttctctcaga ctcccgccat cccacctatg atgtaccccc accctgccta tccgatgcct
721 ttcatcacca ccattccggg agggctgtac ccatccaagt ccatcatcct gtcaggcact
781 gtcctgccca gtgctcagag gttccacatc aacctgtgct ctgggagcca catcgccttc
841 cacatgaacc cccgttttga tgagaatgct gtggtccgta acacccagat caacaactct
901 tgggggtctg aggagcgaag tctgccccga aaaatgccct tcgtccgagg ccagagcttc
961 tcggtgtgga tcttgtgtga agctcactgc ctcaaggtgg ccgtggatgg tcagcacgtg
1021 tttgaatact accatcgcct gaggaacctg cccaccatca acaaactgga agtgggtggc
1081 gacatccagc tgacccacgt gcagacatag gcggctccct ggccctgggg ccgggggctg
1141 gggtgtgggg cagtctgggt cctctcatca tccccacttc ccaggcccag cctttccaac
1201 cgtgcctggg atctgggctt taatgcagag gccatgtcct tatctggtcc tgcttctggc
1261 tacagccacc ctggaatcga gaaggcagct gactgggatt gccttcctca gccgcagcag
1321 cacctggggc gccagctgct ggaatcctac aatcccagaa ggcgggcaca gccagggaga
1381 ggggaggagt gggcagtgaa gatgaagccc catgctcagt cccctcccat cccccacgca
1441 gctccacccc agtctcaagc caccagctgt ctgctcctgg tgggagatgg cctcctcagc
1501 ccctcctctc tgacctttaa cctcactctc accttgcacc ctgcaccaac ccttcacccc
1561 tcctggaaag caggcctgat ggcttcccac tggcctccac caactgacca gagtgttctc
1621 ttcaggggac tggctccttt cccagtgtcc ttaaaataaa gaaatgaaaa tgcttgttgg
1681 cacattcaaa aaaaaaaaaa aaaaaaaaaa aa
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