LOCUS BC073862 1260 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens asparagine-linked glycosylation 11,
alpha-1,2-mannosyltransferase homolog (yeast), mRNA (cDNA clone
IMAGE:5527117), partial cds.
ACCESSION BC073862
VERSION BC073862.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1260)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1260)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: o Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51871373.
FEATURES Location/Qualifiers
source 1..1260
/db_xref="H-InvDB:HIT000265086"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5527117"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1260
/gene="ALG11"
/gene_synonym="GT8"
/gene_synonym="UTP14C"
/db_xref="GeneID:440138"
/db_xref="HGNC:HGNC:32456"
CDS <1..667
/gene="ALG11"
/gene_synonym="GT8"
/gene_synonym="UTP14C"
/codon_start=2
/product="ALG11 protein"
/protein_id="AAH73862.1"
/db_xref="GeneID:440138"
/db_xref="HGNC:HGNC:32456"
/translation="GNCTNIVYPPCDVQTFLDIPLHEKKMTPGHLLVSVGQFRPEKNH
PLQIRAFAKLLNKKMVESPPSLKLVLIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFK
INIPFDELKNYLSEATIGLHTMWNEHFGIGVVECMAAGTIILAHNSGGPKLDIVVPHE
GDITGFLAESEEDYAETIAHILSMSAEKRLQIRKSARASVSRFSDQEFEVTFLSSVEK
LFK"
BASE COUNT 410 a 211 c 289 g 350 t
ORIGIN
1 tgggaattgc actaacattg tttatccacc ttgtgatgtg cagacatttc tggacattcc
61 cttacatgag aaaaagatga ccccaggaca tttgctggtt tctgttggcc agtttaggcc
121 ggaaaagaat catccattgc agatcagagc ctttgctaaa ttgctgaata agaagatggt
181 tgagtcacct ccttcgctta aacttgtcct cattggaggt tgtcgtaaca aagatgatga
241 acttagggta aaccaactga gaaggctgtc tgaggattta ggagttcaag aatatgtgga
301 atttaaaata aacattccat ttgatgaatt aaagaattat ttgtctgaag caacaattgg
361 tctgcatacc atgtggaacg agcattttgg gattggagtt gtggagtgta tggcagctgg
421 cacaattatc cttgcacaca attcgggggg cccaaagctt gacattgtgg ttcctcacga
481 aggagatata actggctttc tggctgagag tgaagaagac tatgctgaaa ctatcgctca
541 cattctttcc atgtctgcag aaaagagact ccaaatcaga aaaagtgctc gtgcatctgt
601 aagcagattc tctgatcagg aatttgaagt gacattccta tcatctgtgg aaaagttatt
661 taagtaatgc catatctgta aaattaaaga tattttatat aaactggtta aacaccttca
721 tatgtaaata tttttctaaa ttcaatctca tttgtcaaat cattttactt tagaaaacag
781 acaaaatttc cttttagaat aaaaggaagt gttgaaaaga aaatggatga ctagccttcg
841 gcttccattc ttggtataca tgagagaggc tggctgctga gatgaatgtg aaccaggttg
901 cagagaatct ggctttgagc caccaggaag aactagtgga tttgccaaaa aactacccct
961 tgagtgaaaa tgaagatgag ggggacagtg atggagagag aaagcatcaa aagcttctgg
1021 aagcaatcat ttcccttgat ggaaagaata ggcggaaatt ggctgagagg tctgaggcta
1081 gtctgaaagt gtcagagttc agtgtcagtt ctgaaggatc aggagaaaag ctgggccttg
1141 cagatctgct tgagcccgtt aaaacttcat cttctttggc cactgtaaaa aagcaactga
1201 atagagtcaa atcaaagaag gtggtggagt tacctcttaa caaagaaaaa aaaaaaaaaa
//