LOCUS BC073821 1772 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens EF-hand calcium binding domain 4A, mRNA (cDNA clone
MGC:88858 IMAGE:5952348), complete cds.
ACCESSION BC073821
VERSION BC073821.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1772)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1772)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: h Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57527761.
FEATURES Location/Qualifiers
source 1..1772
/db_xref="H-InvDB:HIT000265047"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88858 IMAGE:5952348"
/tissue_type="Pancreas, ductal carcinoma"
/clone_lib="NIH_MGC_110"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1772
/gene="EFCAB4A"
/gene_synonym="MGC45840"
/db_xref="GeneID:283229"
/db_xref="HGNC:HGNC:28703"
CDS 443..1327
/gene="EFCAB4A"
/gene_synonym="MGC45840"
/codon_start=1
/product="EF-hand calcium binding domain 4A"
/protein_id="AAH73821.1"
/db_xref="GeneID:283229"
/db_xref="HGNC:HGNC:28703"
/translation="MASPGKPGADEAQEEEGELEGGSAGPRAAILEQAEELFLLCDKE
AKGFITKHDLQGLQSDLPLTPEQLEAVFESLDQAHTGFLTAREFCLGLGMFVGVASAQ
GANPCRTPEETFESGGLDVQGTAGSLDEEEEEEERFHTVLEQLGVAPVLGEQRAVRTL
WARLQRERPELLGSFEDVLIRASACLEEAARERDGLEQALRRRESEHEREVRALYEET
EQLREQSRRPPSQNFARGERRSRLELELQIREQDLERAGLRQRERRGRRLQEHAERES
QPATATGAAQGAEYTAAG"
BASE COUNT 327 a 576 c 579 g 290 t
ORIGIN
1 caacaacgtg gcctggaggc aatggccctg gcctctcgtg tccccttctc tcacccgccc
61 agacttgccc tctttggagg tcgcccgggc taaggtcttc tccactggcc cctgagattg
121 ccatcacctc cagctcctcc tctcctgaag ttggcagccc ctcctgggtt ccagcctcct
181 gagatgccag acccactggg gcagtaccca caggccctga gcctacatca accaccccag
241 tgacacccca agcctgcagc attttccacc cccagccccc tggtcccacc ttgccttccg
301 cccaccttcc cacctgctgc agggagggcc ctcggctgag ccttcagaca cacttgcacc
361 ccatccgctc ccctcctgaa tttcttctga ccctcccttg gcttcacagc acctgaaggc
421 caggctgagg ccccctgctc tcatggccag ccctggaaag cctggggctg atgaggccca
481 ggaggaggag ggggaactcg aggggggctc tgcagggccg cgggctgcaa tactggagca
541 ggctgaggag ctgtttctgc tgtgtgacaa ggaggctaag ggcttcatca ccaagcacga
601 cctgcagggt ctccagagcg acctgcccct cacgccagag cagctggagg ctgtgtttga
661 aagtctggac caggctcaca ctggcttcct caccgccagg gagttctgcc tgggcctggg
721 gatgtttgtg ggggtggcgt cagcccaggg agcgaacccc tgcaggactc ccgaggagac
781 ctttgagtcg ggcgggctcg acgtgcaggg cacggcgggc tctctggatg aggaggagga
841 agaggaggag cgattccaca ctgtgctgga gcagctgggg gtggccccgg tcctgggcga
901 gcagcgggct gtgaggacgc tctgggccag gctgcagcgc gagcgccccg agctgctggg
961 ctctttcgag gatgttctga tacgcgcgtc ggcctgcctg gaggaggcgg cccgggagcg
1021 cgacggcctg gagcaggcgc tgcggaggcg cgagagcgag cacgagaggg aggtgcgcgc
1081 tctgtacgag gagacggagc agcttcggga gcagagccgg cgcccgccga gtcagaactt
1141 cgcccgcggg gagcggagaa gccgtctgga gctggagctg cagatccgcg agcaggacct
1201 ggaacgcgcg ggcctgcggc agcgggagag acgtggtcgc cgtctccagg aacatgcaga
1261 aagagaaagt cagcctgcta cggcaactgg agctgctcag ggagctgaat acacggctgc
1321 gggatgacag ggacgcctgc gaggccaggc gggcgggcag cagctgcagg aaggctctga
1381 caacagcccg cctgcctggg cccacctgct gctgctgctg ttgctgggct cggcccccca
1441 gacgcggctc tggccacctt cccagtgccc ggtgaccagc cccgagtgac tcacggacca
1501 tgagctagaa gctgcccttg caggaggctt gtcatgggtc gggggtgccc actcaggatg
1561 caggctctcc ccagggggcc ccaggctcgc ctgactgaag acatgaagga cctagcctag
1621 gagtggtcag ggtcccggga gtggccaggg tcccgtgtgt gccctctgcc agtcttcgct
1681 ctgtccccgt tcaatcaacc ccatctcagt tcagcagaaa accccctcgt caaataaaac
1741 ccactgactg caaaaaaaaa aaaaaaaaaa aa
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