LOCUS BC073759 3466 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens polymerase I and transcript release factor, mRNA (cDNA
clone MGC:88766 IMAGE:6572478), complete cds.
ACCESSION BC073759
VERSION BC073759.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3466)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3466)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: o Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42734429.
FEATURES Location/Qualifiers
source 1..3466
/db_xref="H-InvDB:HIT000264987_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88766 IMAGE:6572478"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3466
/gene="PTRF"
/gene_synonym="FKSG13"
/db_xref="GeneID:284119"
/db_xref="HGNC:HGNC:9688"
/db_xref="MIM:603198"
CDS 316..1218
/gene="PTRF"
/gene_synonym="FKSG13"
/codon_start=1
/product="PTRF protein"
/protein_id="AAH73759.1"
/db_xref="GeneID:284119"
/db_xref="HGNC:HGNC:9688"
/db_xref="MIM:603198"
/translation="MEDPTLYIVERPLPGYPDAEAPEPSSAGAQAAEEPSGAGSEELI
KSDQVNGVLVLSLLDKIIGAVDQIQLTQAQLEERQAEMEGAVQSIQGELSKLGEGERP
EEDAAALELSSDEAVEVEEVIEESRAERIKRSGLRRVDDFKKAFSKEKMEKTKVRTRE
NLEKTRLKTKENLEKTRHTLEKRMNKLGTRLVPAERREKLKTSRDKLRKSFTPDHVVY
ARSKTAVYKVPPFTFHVKKIREGQVEVLKATEMVEVGADDDEGGAERGEAGDLRRGSS
PDVHALLEITEESDAVLVDKSDSD"
BASE COUNT 797 a 944 c 1092 g 633 t
ORIGIN
1 gcgcagtgca gagcatccag ggcgagctga gcaagctggg caaggcgcac gccaccacga
61 gcaatacggt gagcaagctg ctggagaagg tgcgcaaggt cagcgtcaac gtgaagaccg
121 tgcgcggcag cctggagcgc caggcggggc agatcaagaa gctggaggtc aacgaggccg
181 agctgctgcg gcgccgcaac tttaaagtca tgatctacca ggatgaagtg aagctgccgg
241 ccaaactgag catcagcaaa tcgctgaaag agtcggaggc gccacccggc cggtcccgca
301 cggctccggg tagccatgga ggaccccacg ctctatattg tcgagcggcc gcttcccggg
361 taccccgacg ccgaggcccc ggagccttcc tccgctgggg ctcaggcagc ggaggagccg
421 tcgggggccg gctcagaaga gctgatcaag tcggaccagg tgaacggcgt gctggtgctg
481 agcctcctgg acaaaatcat cggggccgta gaccagatcc agctgactca agcacagctg
541 gaggagcggc aggcggagat ggagggcgca gtgcagagca tccagggcga gctgagcaag
601 ctgggcgagg gcgagcggcc cgaggaggac gcagcggcgc tggagctttc gtcggacgag
661 gcggtggagg ttgaggaggt tattgaggag tcccgcgcag agcgtatcaa gcgcagcggc
721 ctgcggcgcg tggacgactt caagaaggcc ttctccaagg agaagatgga gaagaccaag
781 gtgcgtaccc gcgagaacct ggagaagacg cgcctcaaga ccaaggaaaa cctggagaag
841 acgcggcaca ccctggagaa gcgcatgaac aagctgggca cgcgcctggt gcccgccgag
901 cggcgcgaga aactgaagac gtcgcgggac aagttgcgca aatccttcac gcccgaccac
961 gtggtgtacg cgcgctccaa gaccgcggtc tacaaggtgc cacccttcac cttccacgtc
1021 aagaagatcc gcgagggcca ggtggaagtg ctcaaggcca ccgagatggt ggaggtgggc
1081 gccgacgacg acgagggcgg cgcggagcgc ggggaggccg gcgacctgcg gcgcgggagc
1141 agccccgacg tgcacgcgct gctggagatc accgaggagt cggacgccgt gctggtggac
1201 aagagcgaca gcgactgagc cgcccccgct gccacccacc ccattcctcg ctccttccga
1261 acttcctctt tcgcattctc tctcggctcg agctggctga gatttttcta aattgaaaac
1321 acgcccccct ccccacacct ccaggaactc cactcccagt cttagagctg ttaggacccg
1381 atggggaggc agcccccgca gtggacagcc cccgcttgga cacagtccga gtggaatggg
1441 aagggaatgg tcaatccctg tcctggttgt ccaagtcggg atctcagagg aaattgcagt
1501 gattccacgg ttaggccccc ctgggggggc tgccttcccc tcagcctctc cccacaccac
1561 ccacccagct gctgtcattc cgctcactga gctcttcttc attctcaccc tgatccctgg
1621 gggactcaaa gccaaaactg cccaaagagg aaagattgaa tcctaaaggg gatccttgcc
1681 cccatgggag gccccctact agaaggacgt gaaagcagct tttgggggaa actgaggcag
1741 tggggaagac agagcagaat gagccctcac cctggctggg ggtccagcac aggctgtatc
1801 tgcagagggt cccagaggaa cgctggagcc aagagaagcc ctgggaagga ggggtgggga
1861 acgacatgca tgtgagggat ggcacactga tgtgtttatg cacctgtaca caggagcgca
1921 tggccatggc tttggaaagg agaatggaaa aatagaagaa ggtcggccgg gcttggtggc
1981 ttaagcctgt aaccccagca ctttgggagg ccgaggtggg cggatcacct gaggtcagga
2041 gttcgggacc agcctggcaa acaccccatc tctactaagc gaaaacccat ctctactaaa
2101 attacaaaaa ttagctgggc atggttgcgc atgcctgtaa tcccagctac tttggaggct
2161 gaggtgggga gaattgcttg aacctgggag gtggaggttg cagtgagcca aggtcgcgac
2221 actgcactcc agcctgggtg acagagtgag actccatctc aacagaagga aaaaaaagga
2281 aaataggaga aggtggaaat gggtgaagag agaagtcccc tcactagctg catgagaaat
2341 ctatcttact gtggttctcc atgggcagca ggaccatttt tcagaatcaa gagggaggac
2401 agtgtgagaa ggcgatgatc caaagaagac agagaggtca gccccacccg atccctcaaa
2461 tgggctcttg gaggcacccc caggggcagc ccatttctca aagtccagaa aattagggtc
2521 ccagaagggg gcagcagcag gctgggagtt aggagggaga gcagggtgcc ggccctgcca
2581 ccaagttgag agctggaggg gaggtgggga gagaacatca cagagcagcc agccctggtt
2641 cactcctggc agtttcttct caagctcctt ccctaggagc atggtggcac gtgcctgtgg
2701 tctcagctac ttgggaggct gaggcgggag gatcgccaga gcccaggagt ttgaggctgc
2761 agtgagctat gagggtgcct ctgtgctcca tcctaggcaa cagagtgaga cgctgtttaa
2821 aaaggaaaaa atccttccct agagctagta tcctaaagct gcagagctag cccagacctc
2881 attggtttcc ttgtccttgg ggtgcttttc ctgaatcttt gggggtgaag ggagtgttgc
2941 tcccagtcca gaggcctgat tctgttcgga ctgggttctc aagacacgac caggttctca
3001 agacacgagt ccccttgttc ctccccatta aagggggttt gtcagaagca agaacagccc
3061 ctctccccag tcacagcctg aagggaggcc ccgagagctt cctccttccc cccacctgct
3121 ccttaccttc tctgccctgc tttttagaac tgcagttcat tgttttaagg gattggggga
3181 gggagcctgg ggacacaaac cttttataca atacaaagct ttgctttttt ttttttttct
3241 tccttttccc tttctcggtt ctcttctctc ctctgaatgg ctgaagaccc ctctgccgag
3301 ggaggttggg gattgtggga caaggtccct tggtgctgat ggcctgaagg ggcctgagct
3361 gtgggcagat gcagttttct gtgggcttgg ggaacctctc acgttgctgt gtcctggtga
3421 gcagcccgac caataaacct gcttttctaa aaaaaaaaaa aaaaaa
//