LOCUS BC073167 2569 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens lysophosphatidic acid receptor 1, mRNA (cDNA clone
MGC:87864 IMAGE:6193969), complete cds.
ACCESSION BC073167
VERSION BC073167.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2569)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2569)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: n Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45580698.
FEATURES Location/Qualifiers
source 1..2569
/db_xref="H-InvDB:HIT000264962"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87864 IMAGE:6193969"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2569
/gene="LPAR1"
/gene_synonym="edg-2"
/gene_synonym="Gpcr26"
/gene_synonym="GPR26"
/gene_synonym="LPA1"
/gene_synonym="Mrec1.3"
/gene_synonym="rec.1.3"
/gene_synonym="vzg-1"
/gene_synonym="VZG1"
/db_xref="GeneID:1902"
/db_xref="HGNC:HGNC:3166"
/db_xref="MIM:602282"
CDS 350..1390
/gene="LPAR1"
/gene_synonym="edg-2"
/gene_synonym="Gpcr26"
/gene_synonym="GPR26"
/gene_synonym="LPA1"
/gene_synonym="Mrec1.3"
/gene_synonym="rec.1.3"
/gene_synonym="vzg-1"
/gene_synonym="VZG1"
/codon_start=1
/product="LPAR1 protein"
/protein_id="AAH73167.1"
/db_xref="GeneID:1902"
/db_xref="HGNC:HGNC:3166"
/db_xref="MIM:602282"
/translation="MNEPQCFYNESIAFFYNRSGKHLATEWNTVSKLVMGLGITVCIF
IMLANLLVMVAIYVNRRFHFPIYYLMANLAAADFFAGLAYFYLMFNTGPNTRRLTVST
WLLRQGLIDTSLTASVANLLAIAIERHITVFRMQLHTRMSNRRVVVVIVVIWTMAIVM
GAIPSVGWNCICDIENCSNMAPLYSDSYLVFWAIFNLVTFVVMVVLYAHIFGYVRQRT
MRMSRHSSGPRRNRDTMMSLLKTVVIVLGAFIICWTPGLVLLLLDVCCPQCDVLAYEK
FFLLLAEFNSAMNPIIYSYRDKEMSATFRQILCCQRSENPTGPTEGSDRSASSLNHTI
LAGVHSNDHSVV"
BASE COUNT 762 a 563 c 503 g 741 t
ORIGIN
1 ctcaagggaa cagctcctgc ccaggtctgt gggcactcag catggatttc agtctccctg
61 tgagtgatgg gaaagaacta acagaggtgg acgtctgatt tatgaagctc cccatccacc
121 tatctgagta cctgacttct caggactgac acctacagca tcaggtacac agcttctcct
181 agcatgactt cgatctgatc agcaaacaag aaaatttgtc tcccgtagtt ctggggcgtg
241 ttcaccacct acaaccacag agctgtcatg gctgccatct ctacttccat ccctgtaatt
301 tcacagcccc agtgggaggt gatttcttct ttggcgagag ttcacagcca tgaatgaacc
361 acagtgcttc tacaacgagt ccattgcctt cttttataac cgaagtggaa agcatcttgc
421 cacagaatgg aacacagtca gcaagctggt gatgggactt ggaatcactg tttgtatctt
481 catcatgttg gccaacctat tggtcatggt ggcaatctat gtcaaccgcc gcttccattt
541 tcctatttat tacctaatgg ctaatctggc tgctgcagac ttctttgctg ggttggccta
601 cttctatctc atgttcaaca caggacccaa tactcggaga ctgactgtta gcacatggct
661 ccttcgtcag ggcctcattg acaccagcct gacggcatct gtggccaact tactggctat
721 tgcaatcgag aggcacatta cggttttccg catgcagctc cacacacgga tgagcaaccg
781 gcgggtagtg gtggtcattg tggtcatctg gactatggcc atcgttatgg gtgctatacc
841 cagtgtgggc tggaactgta tctgtgatat tgaaaattgt tccaacatgg cacccctcta
901 cagtgactct tacttagtct tctgggccat tttcaacttg gtgacctttg tggtaatggt
961 ggttctctat gctcacatct ttggctatgt tcgccagagg actatgagaa tgtctcggca
1021 tagttctgga ccccggcgga atcgggatac catgatgagt cttctgaaga ctgtggtcat
1081 tgtgcttggg gcctttatca tctgctggac tcctggattg gttttgttac ttctagacgt
1141 gtgctgtcca cagtgcgacg tgctggccta tgagaaattc ttccttctcc ttgctgaatt
1201 caactctgcc atgaacccca tcatttactc ctaccgcgac aaagaaatga gcgccacctt
1261 taggcagatc ctctgctgcc agcgcagtga gaaccccacc ggccccacag aaggctcaga
1321 ccgctcggct tcctccctca accacaccat cttggctgga gttcacagca atgaccactc
1381 tgtggtttag aacggaaact gagatgagga accagccgtc ctctcttgga ggataaacag
1441 cctcccccta cccaattgcc agggcaaggt ggggtgtgag agaggagaaa agtcaactca
1501 tgtacttaaa cactaaccaa tgacagtatt tgttcctgga ccccacaaga cttgatatat
1561 attgaaaatt agcttatgtg acaaccctca tcttgatccc catcccttct gaaagtagga
1621 agttggagct cttgcaatgg aattcaagaa cagactctgg agtgtccatt tagactacac
1681 taactagact tttaaaagat tttgtgtggt ttggtgcaag tcagaataaa ttctggctag
1741 ttgaatccac aacttcattt atatacaggc ttcccttttt tatttttaaa ggatacgttt
1801 cacttaataa acacgtttat gcctatcagc atgtttgtga tggatgagac tatggactgc
1861 ttttaaacta ccataattcc attttttccc ttacatagga aaactgtaag ttggaattat
1921 cttttgttta gaaagcatgc atgtaatgta tgtatgcagt atgccttact taaaaagatt
1981 aaaaggatac taatgttaaa tcttctagga aatagaacct agacttcaaa gccagtattt
2041 gtttaggtca tgaagcaaac aatgctctaa tcacaatatt aactgtttaa ttaaaatgtt
2101 gtaacaagta taaaacaggg aatgtaagtt tattaccaaa gtgatatgta ttccaaaaaa
2161 gtcatagaag atgaagcact ataatattgt tcccatatat ttaaaatacc caagtacatt
2221 ctatttacca gtatatcaga ggaaaatttt cgtagtcttt gtaaaataat atactcatca
2281 tagaaaattt gaaaaatgca gaaatgtata aaaaagcaaa aatgattact gataatatca
2341 caacccagaa gtaaccacct ttaaaaagca acccccatgt atgcctatat gtgtattgta
2401 tacttttttt acataattgg agtcatactg taaacagttt tataagtaga tctttttcat
2461 tgcaaaattg ccacattttc ttatggcatt aaaaatttta caaaaacata aaaaaaaaaa
2521 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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