LOCUS BC073162 1385 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA
clone MGC:87898 IMAGE:6154972), complete cds.
ACCESSION BC073162
VERSION BC073162.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1385)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1385)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: j Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4504444.
FEATURES Location/Qualifiers
source 1..1385
/db_xref="H-InvDB:HIT000264957"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87898 IMAGE:6154972"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1385
/gene="HNRPA1"
/gene_synonym="HNRNPA1"
/db_xref="GeneID:3178"
/db_xref="HGNC:HGNC:5031"
/db_xref="MIM:164017"
CDS 45..1007
/gene="HNRPA1"
/gene_synonym="HNRNPA1"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein A1"
/protein_id="AAH73162.1"
/db_xref="GeneID:3178"
/db_xref="HGNC:HGNC:5031"
/db_xref="MIM:164017"
/translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCV
VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHL
TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD
KIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGR
GGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPM
KGGNFGGRSSGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF"
BASE COUNT 431 a 232 c 381 g 341 t
ORIGIN
1 gccgccgaag aagcatcgtt aaagtctctc ttcaccctgc cgtcatgtct aagtcagagt
61 ctcctaaaga gcccgaacag ctgaggaagc tcttcattgg agggttgagc tttgaaacaa
121 ctgatgagag cctgaggagc cattttgagc aatggggaac gctcacggac tgtgtggtaa
181 tgagagatcc aaacaccaag cgctccaggg gctttgggtt tgtcacatat gccactgtgg
241 aggaggtgga tgcagctatg aatgcaaggc cacacaaggt ggatggaaga gttgtggaac
301 caaagagagc tgtctccaga gaagattctc aaagaccagg tgcccactta actgtgaaaa
361 agatatttgt tggtggcatt aaagaagaca ctgaagaaca tcacctaaga gattattttg
421 aacagtatgg aaaaattgaa gtgattgaaa tcatgactga ccgaggcagt ggcaagaaaa
481 ggggctttgc ctttgtaacc tttgacgacc atgactccgt ggataagatt gtcattcaga
541 aataccatac tgtgaatggc cacaactgtg aagttagaaa agccctgtca aagcaagaga
601 tggctagtgc ttcatccagc caaagaggtc gaagtggttc tggaaacttt ggtggtggtc
661 gtggaggtgg tttcggtggg aatgacaact tcggtcgtgg aggaaacttc agtggtcgtg
721 gtggctttgg tggcagccgt ggtggtggtg gatatggtgg cagtggggat ggctataatg
781 gatttggtaa tgatggaagc aattttggag gtggtggaag ctacaatgat tttgggaatt
841 acaacaatca gtcttcaaat tttggaccca tgaagggagg aaattttgga ggcagaagct
901 ctggccccta tggcggtgga ggccaatact ttgcaaaacc acgaaaccaa ggtggctatg
961 gcggttccag cagcagcagt agctatggca gtggcagaag attttaatta ggaaacaaag
1021 cttagcagga gaggagagcc agagaagtga cagggaagct acaggttaca acagatttgt
1081 gaactcagcc aagcacagtg gtggcagggc ctagctgcta caaagaagac atgttttaga
1141 caaatactca tgtgtatggg caaaaaactc gaggactgta tttgtgacta attgtataac
1201 aggttatttt agtttctgtt ctgtggaaag tgtaaagcat tccaacaaag ggttttaatg
1261 tagatttttt tttttgcacc ccatgctgtt gattgctaaa tgtaacagtc tgatcgtgac
1321 gctgaataaa tgtctttttt ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaa
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