LOCUS BC072432 2088 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens immediate early response 2, mRNA (cDNA clone MGC:87997
IMAGE:5727038), complete cds.
ACCESSION BC072432
VERSION BC072432.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2088)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2088)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: a Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48675810.
FEATURES Location/Qualifiers
source 1..2088
/db_xref="H-InvDB:HIT000264877"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87997 IMAGE:5727038"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_124"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2088
/gene="IER2"
/gene_synonym="ETR101"
/db_xref="GeneID:9592"
/db_xref="HGNC:HGNC:28871"
CDS 329..1000
/gene="IER2"
/gene_synonym="ETR101"
/codon_start=1
/product="immediate early response 2"
/protein_id="AAH72432.1"
/db_xref="GeneID:9592"
/db_xref="HGNC:HGNC:28871"
/translation="MEVQKEAQRIMTLSVWKMYHSRMQRGGLRLHRSLQLSLVMRSAR
ELYLSAKVEALEPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAP
TAEETSACCAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRL
QPPPAQAEGAFPNLARVLQRRFSGLLNCSPAAPPTAPPACEAKPACRPADSMLNVLVR
AVVAF"
BASE COUNT 382 a 608 c 681 g 417 t
ORIGIN
1 ggtccgagtt cggaatttcg gttcaaggcc cagttcctcg gattgttcct gcgcaacttc
61 agtttccctt ccaggcacgg gcaatgagtg tttggccgcg acgagttgga aagcccggat
121 gcgtccttcg gttgggcggg gtgtctcagt gacgtcactg ggggtataaa agggcctggg
181 tggcgggcgc ctgggcagag cgtcctagca gtgtcactgc gtgggttggt ttgtgtagag
241 aggcgtgagc gagcccgttg tccggagtgc acctgctgcc tgttctgtcc ctcccgggag
301 cccccgccgc tgtcgccgtc gagtcgccat ggaagtgcag aaagaggcac agcgcatcat
361 gaccctgtcg gtgtggaaga tgtatcactc ccgcatgcag cgcggtggcc tgcggctgca
421 ccggagtctg cagctgtcgc tggtcatgcg cagcgcccgg gagctctacc tctcggccaa
481 ggtggaggcc ctcgagcccg aggtgtcgtt gccggccgcc ctcccctctg accctcgcct
541 gcacccgccc cgagaagccg agtccacggc cgagacagcg acccccgacg gtgagcaccc
601 gtttccggag ccaatggaca cgcaggaggc gccgacagcc gaggagacct ccgcctgctg
661 tgccccgcgc cccgccaaag tcagccgcaa acgacgcagc agcagcctga gcgacggcgg
721 ggacgctgga ctggtcccga gcaagaaagc ccgtctggaa gaaaaggaag aagaggaggg
781 agcgtcatcc gaagtcgccg atcgcctgca gccccctccg gcgcaagcgg agggcgcctt
841 tcccaacctg gcccgcgtcc tgcagaggcg cttctccggc ctcctgaact gcagccccgc
901 ggcccctccg acggcgccgc ccgcgtgcga ggcaaagccc gcttgccgcc cggcggacag
961 catgctcaac gtgctcgtgc gggccgtggt ggccttctga ggaccccgag cggcgctgcc
1021 ggagcccaga gcgcgcgtcg aaccgtcggc ccgagggcgc agacctgagg cgaggccacc
1081 cccctccatc ctgggggaag cgcccgcgaa aaccgtggag agaagccgcc gcccgggctg
1141 ctgagaggcc cggagaggga ctctgtcccc ggggagccat cgccttcagt gtgcagggac
1201 ggcaccgagg agtctgagcc gggggcgcgg gcgccttccg cagagacctg cgcccacagg
1261 tgctgtctta gtggactggg acgtgaacct ttcgctctcc ttctggactg ggagaaggga
1321 ggcttgggtg ttgtgttttt tgttttgttt gtttgtttgt ttttaaagat ctcctcaggg
1381 tcggacttca ttttgtactg tgggctgtgc tggccctttc aaggtttttc aagagttggt
1441 tttgcgtttc caacctcgga gaattccagg cactcccctt ccccctccgc tgacatactt
1501 gtataagcgg tcatcgttgc gtcatggggc aggcgtgggg agcttcctgt cgccttgcgt
1561 gggtgtgggg cctgggagga ggtcctgggg cgtgcacccg ccctgggcag tggggaggag
1621 agtggcctga gttacttcac ccccgcgtgc tgctggttaa tgtcccgcgt ctctgcacct
1681 tcgggtggga gcggggactg atctactttc acattctcaa gtttttctca tctgcattag
1741 aggtgcccag taggttccca ggttccagcg tgcccctccc tcagacacac ggacacaatc
1801 agccgagaag ttcctggtct gaatcacgag aatgtggagg ggtggggggt gtcagtggaa
1861 aggcataagg ctgagctgag accagttgct ggtgaaactg ggccaatctg gggaggggaa
1921 catccttgcc agggagtttc tgagggtctg ctttgtttac ctttcgtgcg gtggattctt
1981 tttaactccg tctacctggc gttttgttag aaatgtcaga taggaaaata aaaaccattt
2041 gagtaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//