LOCUS BC072019 1514 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens keratin 17, mRNA (cDNA clone MGC:88731 IMAGE:5442690),
complete cds.
ACCESSION BC072019
VERSION BC072019.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1514)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1514)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: f Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557700.
FEATURES Location/Qualifiers
source 1..1514
/db_xref="H-InvDB:HIT000264822"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88731 IMAGE:5442690"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1514
/gene="KRT17"
/gene_synonym="K17"
/gene_synonym="PC"
/gene_synonym="PC2"
/db_xref="GeneID:3872"
/db_xref="HGNC:HGNC:6427"
/db_xref="MIM:148069"
CDS 47..1345
/gene="KRT17"
/gene_synonym="K17"
/gene_synonym="PC"
/gene_synonym="PC2"
/codon_start=1
/product="keratin 17"
/protein_id="AAH72019.1"
/db_xref="GeneID:3872"
/db_xref="HGNC:HGNC:6427"
/db_xref="MIM:148069"
/translation="MTTSIRQFTSSSSIKGSSGLGGGSSRTSCRLSGGLGAGSCRLGS
AGGLGSTLGGSSYSSCYSFGSGGGYGSSFGGVDGLLAGGEKATMQNLNDRLASYLDKV
RALEEANTELEVKIRDWYQRQAPGPARDYSQYYRTIEELQNKILTATVDNANILLQID
NARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARADLEMQIENLKEELAYL
KKNHEEEMNALRGQVGGEINVEMDAAPGVDLSRILNEMRDQYEKMAEKNRKDAEDWFF
SKTEELNREVATNSELVQSGKSEISELRRTMQALEIELQSQLSMKASLEGNLAETENR
YCVQLSQIQGLIGSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIATYRRLLEGED
AHLTQYKKEPVTTRQVRTIVEEVQDGKVISSREQVHQTTR"
BASE COUNT 336 a 458 c 469 g 251 t
ORIGIN
1 cctctccagc ccttctcctg tgtgcctgcc tcctgccgcc gccaccatga ccacctccat
61 ccgccagttc acctcctcca gctccatcaa gggctcctcc ggcctggggg gcggctcgtc
121 ccgcacctcc tgccggctgt ctggcggcct gggtgccggc tcctgcaggc tgggatctgc
181 tggcggcctg ggcagcaccc tcgggggtag cagctactcc agctgctaca gctttggctc
241 tggtggtggc tatggcagca gctttggggg tgttgatggg ctgctggctg gaggtgagaa
301 ggccaccatg cagaacctca atgaccgcct ggcctcctac ctggacaagg tgcgtgccct
361 ggaggaggcc aacactgagc tggaggtgaa gatccgtgac tggtaccaga ggcaggcccc
421 ggggcccgcc cgtgactaca gccagtacta caggacaatt gaggagctgc agaacaagat
481 cctcacagcc accgtggaca atgccaacat cctgctacag attgacaatg cccgtctggc
541 tgctgatgac ttccgcacca agtttgagac agagcaggcc ctgcgcctga gtgtggaggc
601 cgacatcaat ggcctgcgca gggtgctgga tgagctgacc ctggccagag ccgacctgga
661 gatgcagatt gagaacctca aggaggagct ggcctacctg aagaagaacc acgaggagga
721 gatgaacgcc ctgcgaggcc aggtgggtgg tgagatcaat gtggagatgg acgctgcccc
781 aggcgtggac ctgagccgca tcctcaacga gatgcgtgac cagtatgaga agatggcaga
841 gaagaaccgc aaggatgccg aggattggtt cttcagcaag acagaggaac tgaaccgcga
901 ggtggccacc aacagtgagc tggtgcagag tggcaagagt gagatctcgg agctccggcg
961 caccatgcag gccttggaga tagagctgca gtcccagctc agcatgaaag catccctgga
1021 gggcaacctg gcggagacag agaaccgcta ctgcgtgcag ctgtcccaga tccaggggct
1081 gattggcagc gtggaggagc agctggccca gcttcgctgc gagatggagc agcagaacca
1141 ggaatacaaa atcctgctgg atgtgaagac gcggctggag caggagattg ccacctaccg
1201 ccgcctgctg gagggagagg atgcccacct gactcagtac aagaaagaac cggtgaccac
1261 ccgtcaggtg cgtaccattg tggaagaggt ccaggatggc aaggtcatct cctcccgcga
1321 gcaggtccac cagaccaccc gctgaggact cagctacccc ggccggccac ccaggaggca
1381 gggaggcagc cgccccatct gccccacagt ctccggcctc tccagcctca gccccctgct
1441 tcagtccctt ccccatgctt ccttgcctga tgacaataaa gcttgttgac tcagctaaaa
1501 aaaaaaaaaa aaaa
//