LOCUS BC072018 1461 bp mRNA linear HUM 25-JUN-2004
DEFINITION Homo sapiens keratin 17, mRNA (cDNA clone MGC:88730 IMAGE:3531173),
complete cds.
ACCESSION BC072018
VERSION BC072018.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1461)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1461)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: a Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557700.
FEATURES Location/Qualifiers
source 1..1461
/db_xref="H-InvDB:HIT000264821"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88730 IMAGE:3531173"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1461
/gene="KRT17"
/gene_synonym="K17"
/gene_synonym="PC"
/gene_synonym="PC2"
/gene_synonym="PCHC1"
/db_xref="GeneID:3872"
/db_xref="MIM:148069"
CDS 238..1287
/gene="KRT17"
/gene_synonym="K17"
/gene_synonym="PC"
/gene_synonym="PC2"
/gene_synonym="PCHC1"
/codon_start=1
/product="KRT17 protein"
/protein_id="AAH72018.1"
/db_xref="GeneID:3872"
/db_xref="MIM:148069"
/translation="MAAALGVLMGCWLEVRRPPCRTSMTNTELEVKIRDWYQRQAPGP
ARDYSQYYRTIEELQNKILTATVDNANILLQIDNARLAADDFRTKFETEQALRLSVEA
DINGLRRVLDELTLARADLEMQIENLKEELAYLKKNHEEEMNALRGQVGGEINVEMDA
APGVDLSRILNEMRDQYEKMAEKNRKDAEDWFFSKTEELNREVATNSELVQSGKSEIS
ELRRTMQALEIELQSQLSMKASLEGNLAETENRYCVQLSQIQGLIGSVEEQLAQLRCE
MEQQNQEYKILLDVKTRLEQEIATYRRLLEGEDAHLTQYKKEPVTTRQVRTIVEEVQD
GKVISSREQVHQTTR"
BASE COUNT 334 a 435 c 452 g 240 t
ORIGIN
1 ctcctgtgtg cctgcctcct gccgccgcca ccatgaccac ctccatccgc cagttcacct
61 cctccagctc catcaagggc tcctccggcc tggggggcgg ctcgtcccgc acctcctgcc
121 ggctgtctgg cggcctgggt gccggctcct gcaggctggg atctgctggc ggcctgggca
181 gcaccctcgg gggtagcagc tactccagct gctacagctt tggctctggt ggtggctatg
241 gcagcagctt tgggggtgtt gatgggctgc tggctggagg tgagaaggcc accatgcaga
301 acctcaatga ccaacactga gctggaggtg aagatccgtg actggtacca gaggcaggcc
361 ccggggcccg cccgtgacta cagccagtac tacaggacaa ttgaggagct gcagaacaag
421 atcctcacag ccaccgtgga caatgccaac atcctgctac agattgacaa tgcccgtctg
481 gctgctgatg acttccgcac caagtttgag acagagcagg ccctgcgcct gagtgtggag
541 gccgacatca atggcctgcg cagggtgctg gatgagctga ccctggccag agccgacctg
601 gagatgcaga ttgagaacct caaggaggag ctggcctacc tgaagaagaa ccacgaggag
661 gagatgaacg ccctgcgagg ccaggtgggt ggtgagatca atgtggagat ggacgctgcc
721 ccaggcgtgg acctgagccg catcctcaac gagatgcgtg accagtatga gaagatggca
781 gagaagaacc gcaaggatgc cgaggattgg ttcttcagca agacagagga actgaaccgc
841 gaggtggcca ccaacagtga gctggtgcag agtggcaaga gtgagatctc ggagctccgg
901 cgcaccatgc aggccttgga gatagagctg cagtcccagc tcagcatgaa agcatccctg
961 gagggcaacc tggcggagac agagaaccgc tactgcgtgc agctgtccca gatccagggg
1021 ctgattggca gcgtggagga gcagctggcc cagcttcgct gcgagatgga gcagcagaac
1081 caggaataca aaatcctgct ggatgtgaag acgcggctgg agcaggagat tgccacctac
1141 cgccgcctgc tggagggaga ggatgcccac ctgactcagt acaagaaaga accggtgacc
1201 acccgtcagg tgcgtaccat tgtggaagag gtccaggatg gcaaggtcat ctcctcccgc
1261 gagcaggtcc accagaccac ccgctgagga ctcagctacc ccggccggcc acccaggagg
1321 cagggaggca gccgccccat ctgccccaca gtctccggcc tctccagcct cagccccctg
1381 cttcagtccc ttccccatgc ttccttgcct gatgacaata aagcttgttg actcagctaa
1441 aaaaaaaaaa aaaaaaaaaa a
//