LOCUS BC071890 2544 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ladinin 1, mRNA (cDNA clone MGC:88569 IMAGE:6082757),
complete cds.
ACCESSION BC071890
VERSION BC071890.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2544)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2544)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: i Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32455232.
FEATURES Location/Qualifiers
source 1..2544
/db_xref="H-InvDB:HIT000264701"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88569 IMAGE:6082757"
/tissue_type="Pancreas, ductal carcinoma"
/clone_lib="NIH_MGC_110"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2544
/gene="LAD1"
/gene_synonym="LadA"
/gene_synonym="MGC10355"
/db_xref="GeneID:3898"
/db_xref="HGNC:HGNC:6472"
/db_xref="MIM:602314"
CDS 297..1850
/gene="LAD1"
/gene_synonym="LadA"
/gene_synonym="MGC10355"
/codon_start=1
/product="ladinin 1"
/protein_id="AAH71890.1"
/db_xref="GeneID:3898"
/db_xref="HGNC:HGNC:6472"
/db_xref="MIM:602314"
/translation="MAVSRKDWSALSSLARQRTLEDEEEQERERRRRHRNLSSTTDDE
APRLSQNGDRQASASERLPSVEEAEVPKPLPPASKDEDEDIQSILRTRQERRQRRQVV
EAAQAPIQERLEAEEGRNSLSPVQATQKPLVSKKELEIPPRRRLSREQRGPWALEEES
LVGREPEERKKGVPEKSPVLEKSSMPKKTAPEKSLVSDKTSISEKVLASEKTSLSEKI
AVSEKRNSSEKKSVLEKTSVSEKSLAPGMALGSGRRLVSEKASIFEKALASEKSPAAD
AKPAPKRATASEQPLAQEPPASGGSPATTKEQRGRALPGKNLPSLAEQGASDPPTVAS
RLPPVTLQVKIPSKEEEADMSSPTQRTYSSSLKRSSPRTISFRMKPKKENSETTLTRS
ASMKLPDNTVKLGEKLERYHTAIRRSESVKSRGLPCTELFVAPVGVASKRHLFEKELA
GQSRAEPASSRKENLRLSGVVTSRLNLWISRTQESGDQDPQEAQKASSATERTQWGQK
SDSSLDAEV"
BASE COUNT 588 a 787 c 755 g 414 t
ORIGIN
1 cagccgacca gccccacgcc ggccccgggc gtccgtcgtt cggtcccgcg atccgtccga
61 cggtccaccc agtgcttgcg gcctcgcggc cgggccggcc tgggctgcaa tcaatgcggc
121 tttgtctggg acgcccacat cccagaggcc attcccgggt cggcaaatcg gagcgcggcc
181 ggggcgcgcg ggggtgagat aagcggccat gtgatcccac ctgggctgga aggggagggg
241 cgccaggtga ggcggcggcc ggcggggcgc gggcggccac gcggggctcc tgcagcatgg
301 ctgtcagcag gaaggactgg tccgcgctgt ccagccttgc ccggcagagg actctggagg
361 atgaggagga acaggagcgc gagcgcaggc ggcggcaccg caacctgagc tccaccacgg
421 acgatgaggc tcccaggctc agccagaatg gagaccggca ggcctctgct tctgagagac
481 taccgagcgt ggaagaagca gaggtgccca agccactgcc cccagcctcc aaagatgagg
541 acgaggacat ccagagcatc ctcagaacac ggcaggagcg gaggcagagg cggcaggtgg
601 tggaggctgc acaggccccc atccaggaga ggctggaggc agaggagggg aggaacagct
661 tgagccctgt gcaggccaca cagaaacccc tagtctccaa gaaggaactg gaaatcccac
721 ctcgccggag actgagtcgg gaacagcggg gcccctgggc cctggaggag gagagcttgg
781 tgggcaggga gccagaagag aggaagaaag gggttccaga aaagtcccca gtcttggaga
841 aatcctccat gccaaagaag acggcacctg aaaagagcct ggtctccgat aaaacctcca
901 tctctgagaa ggtgctggcc tcagagaaga catctctatc agagaagata gcagtgtcag
961 agaaaagaaa cagctcagag aagaagtctg ttctagaaaa aaccagtgtc tctgagaagt
1021 cgctggcccc agggatggca ctgggctcag gaaggaggct ggtgtctgag aaagcttcca
1081 tctttgagaa ggcactggcc tcagagaaga gcccagctgc agatgctaag ccggccccaa
1141 agagggccac agcctcagag cagcccctgg cgcaggagcc gccagcctct gggggaagcc
1201 cagccaccac caaggagcag agaggaaggg ccctccctgg gaagaacctg ccctctttgg
1261 cagagcaggg ggcttcagac cctccgactg tggcctcccg cctcccaccc gtcacactcc
1321 aggtgaaaat ccccagcaag gaggaagagg cagatatgtc ctcacccaca cagcgaacct
1381 acagcagctc cctcaaacgc tccagcccca ggaccatctc ctttcggatg aaacccaaga
1441 aagaaaactc ggaaacaacc ctaactcgca gtgccagcat gaagctccca gacaacacag
1501 tgaagttggg agagaagctg gagagatacc acacggccat acggagatca gaatctgtca
1561 agtctcgggg tctgccttgc actgagttat tcgtggctcc tgtgggtgta gccagcaagc
1621 gccacctctt tgagaaggaa ctggcgggcc agagccgagc agaaccagcc tccagccgga
1681 aggagaactt gaggctctca ggggttgtga catcaaggct caacctgtgg atcagcagga
1741 cccaggaatc tggagatcag gacccccagg aggcacagaa agcatcatct gcaaccgaga
1801 ggactcagtg gggacagaaa tctgactcct cgctggacgc tgaggtgtga caagccccgc
1861 caagacagac ctgcaagtct tcgtctcaag ggacctccct catgccaggc ccctgcctct
1921 cacagcagca ccctttcctc tcattgtccc tgttcccttt ttgcctgtgg atctgtttgg
1981 ccagggtccc tggggtcagg aatatttgca agactcagcc agctccttcc cagcccagcc
2041 tcttggggct gggactttct caccctgcgg caggcacaac agatgctggg acccagtctc
2101 tgcccaggtc acagcacaag tgcacatcag cactatgggg cctatgtcct gcccagagac
2161 ctctgctcct tcctgctcac atccacagtc agggcacggc gcccctcaag aactccagag
2221 tcacctgtct catcggctcc cagcaagtgc ctctttgtct atgatgtccc ccttctctga
2281 ggcctggacc cacccatctt tgtccctggg gcctgctccc agccactgag gcccgctctg
2341 gccaggggag aaggagctgc cgtgcgtctt ccctgtgccc cgtctccctg cttggttctc
2401 ccctcccttc cctggccggc tgccatggcc aggagctaag tgcctttttg tgtgcaacca
2461 cttacccttt ctctgaaaaa cctgttctca ggaaggatct gataaactca tttactctca
2521 ggtgaaaaaa aaaaaaaaaa aaaa
//