LOCUS BC071887 1922 bp mRNA linear HUM 25-JUN-2004
DEFINITION Homo sapiens tripartite motif-containing 41, mRNA (cDNA clone
IMAGE:3659307), partial cds.
ACCESSION BC071887
VERSION BC071887.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1922)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1922)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: a Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20127663.
FEATURES Location/Qualifiers
source 1..1922
/db_xref="H-InvDB:HIT000264698"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3659307"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1922
/gene="TRIM41"
/gene_synonym="MGC1127"
/gene_synonym="MGC31991"
/db_xref="GeneID:90933"
CDS <1..1088
/gene="TRIM41"
/gene_synonym="MGC1127"
/gene_synonym="MGC31991"
/codon_start=3
/product="TRIM41 protein"
/protein_id="AAH71887.1"
/db_xref="GeneID:90933"
/translation="AICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELDREEE
EEDGEEEEVEAVGAGAGWDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMSRSSWDNMDY
VWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRC
FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFC
EVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEE
RRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLA
EQAAQLSRLLAEAQERSQQGGLRLLQV"
BASE COUNT 430 a 512 c 622 g 358 t
ORIGIN
1 gcgccatctg cctcgattac ttcacggacc ccgtgtccat cggctgcggg cacaacttct
61 gccgagtttg tgtaacccag ttgtggggtg gggaggatga ggaggacaga gatgagttag
121 atcgggagga ggaggaggag gacggagagg aggaggaagt ggaggctgtg ggggctggcg
181 cggggtggga cacccccatg cgggatgaag actacgaggg tgacatggag gaggaggtcg
241 aggaggaaga agagggtgtg ttctggacca gtggcatgag caggtccagc tgggacaaca
301 tggactatgt gtgggaggag gaggacgagg aggaagacct ggactactac ttgggggaca
361 tggaggagga ggacctgagg ggggaggatg aggaggacga ggaggaagtg ctggaggagg
421 ttgaggaaga ggatctagac cccgtcaccc cactgccccc gcctccagcc cctcggaggt
481 gcttcacatg ccctcagtgc cgaaagagct ttcctcggcg gagcttccgc cccaacctgc
541 agctggccaa tatggtccag gtgattcggc agatgcaccc aacccctggt cgagggagcc
601 gcgtgaccga tcagggcatc tgtcccaaac accaagaagc cctgaagctc ttctgcgagg
661 tagacgaaga ggccatctgt gtggtgtgcc gagaatccag gagccacaaa cagcacagcg
721 tggtgccatt ggaggaggtg gtgcaggagt acaaggccaa actgcagggg cacgtggaac
781 cactgaggaa gcacctggag gcagtgcaga agatgaaagc caaggaggag aggcgagtga
841 cagaactgaa gagccagatg aagtcagagc tggcagcggt ggcctcggag tttgggcgac
901 tgacacggtt tctggctgaa gagcaggcag ggctggaacg gcgtctcaga gagatgcatg
961 aagcccagct ggggcgtgcg ggagccgcgg ctagtcgcct tgcagaacag gccgcccagc
1021 tcagccgcct gctggcagag gcccaggagc ggagccagca ggggggtctc cggctgctcc
1081 aggtgtgaag aggtacagct gcagccccca gaggtctggt cccctgaccc gtgccaaccc
1141 catagccatg acttcctgac agatgccatc gtgaggaaaa tgagccggat gttctgtcag
1201 gctgcgagag tggacctgac gctggaccct gacacggctc acccggccct gatgctgtcc
1261 cctgaccgcc ggggggtccg cctggcagag cggcggcagg aggttgctga ccatcccaag
1321 cgcttctcgg ccgactgctg cgtactgggg gcccagggct tccgctccgg ccggcactac
1381 tgggaggagc ctaaagaacc ctcctggcct ccagctcagc cttctctcac ctactatgtc
1441 tgtccaacag accggccaga atttagcttc acttgagaga gatctggaat ggtcgccatg
1501 attgaaacca cgcaccatta catcatcatt acattaatta catcaacata aattatttct
1561 tcccccttcc cttttccagc actcaaccaa ggagcaaagc tcatcccacc ccacacccct
1621 cccaggtctg ctcactgcca ggctcctctc ccctttgttc agtggagctg gcttttctcc
1681 cagccccttt ccatgccttt cactccattt ggcaagctct gagggggagc ctggggacgg
1741 gtttgggtcc ccaggaggag agccttgggt ataatctatt tttctaggag cctcttgcct
1801 tgtcacttgc agctttcgcc ctctgctttg atggctgagg tgaactcatg ttctttggga
1861 aaagggaagg cgtgctgtgg aaataaaatg tttatttgct tctcaaaaaa aaaaaaaaaa
1921 aa
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