LOCUS BC071866 1571 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens leucine rich repeat and fibronectin type III domain
containing 4, mRNA (cDNA clone IMAGE:5468269), partial cds.
ACCESSION BC071866
VERSION BC071866.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1571)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1571)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: g Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34303919.
FEATURES Location/Qualifiers
source 1..1571
/db_xref="H-InvDB:HIT000264679"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5468269"
/tissue_type="Skin, melanoma, amelanotic"
/clone_lib="NIH_MGC_41"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1571
/gene="LRFN4"
/gene_synonym="SALM3"
/db_xref="GeneID:78999"
/db_xref="HGNC:HGNC:28456"
CDS 190..>1571
/gene="LRFN4"
/gene_synonym="SALM3"
/codon_start=1
/product="LRFN4 protein"
/protein_id="AAH71866.1"
/db_xref="GeneID:78999"
/db_xref="HGNC:HGNC:28456"
/translation="MAPPLLLLLLASGAAACPLPCVCQNLSESLSTLCAHRGLLFVPP
NVDRRTVELRLADNFIQALGPPDFRNMTGLVDLTLSRNAITRIGARAFGDLESLRSLH
LDGNRLVELGTGSLRGPVNLQHLILSGNQLGRIAPGAFDDFLESLEDLDLSYNNLRQV
PWAGIGAMPALHTLNLDHNLIDALPPGAFAQLGQLSRLDLTSNRLATLAPDPLFSRGR
DAEASPAPLVLSFSGNPLHCNCELLWLRRLARPDDLETCASPPGLAGRYFWAVPEGEF
SCEPPLIARHTQRLWVLEGQRATLRCRALGDPAPTMHWVGPDDRLVGNSSRARAFPNG
TLEIGVTGAGDAGGYTCIATNPAGEATARVELRVLALPHGGNSSAEGGRRLAWESLPG
FYSQYLRLPCVLGGAGSPFLGSGLQTRVRAGPSNRCSQPPRQGLQPPTGSLVFIYNKI
VGDTSKKKKK"
BASE COUNT 236 a 568 c 507 g 260 t
ORIGIN
1 aaggtgccgg gaaccgagcg agccggggcc gcgggcccga gcgccatggg cccgagggtg
61 ggcggcgggc ggccggtcat ccccgggcct cgtccccgcg ggagagcggc caggagtcgg
121 cgggggccgg ccgggctcgc agggaggccg gcccgcgccc cctgagcgac ggacaccagg
181 gcgctcacca tggccccgcc gctcctgctg ctgctgctgg ccagtggagc ggccgcctgc
241 ccgctgccct gcgtctgcca gaacctgtcc gagtcgctca gcaccctctg tgcccaccga
301 ggcctgctgt ttgtgccgcc caacgtggac cggcgcacag tggagctgcg gctggctgac
361 aacttcatcc aggccctggg gccccctgac ttccgcaaca tgacgggact ggtggacctg
421 acactgtctc gcaatgccat cacccgcatt ggggcccgcg cctttgggga cctcgagagc
481 ctgcgttccc tccaccttga cggcaacagg ctggtggagc tgggcaccgg gagcctccgg
541 ggccccgtca atctgcagca cctcatcctc agcggcaacc agctgggccg catcgcgccg
601 ggagccttcg acgacttcct agagagcctg gaggacctgg acctgtccta caacaacctc
661 cggcaggtgc cctgggccgg catcggcgcc atgcctgccc tgcacaccct caacctggac
721 cataacctta ttgacgcact gcccccaggc gccttcgccc agctcggtca gctctcccgc
781 ctggacctca cctccaaccg cctggccacg ctggctccgg acccgctttt ctctcgtggg
841 cgtgatgcag aggcctctcc cgcccccctg gtgctgagct ttagcgggaa ccccctgcac
901 tgcaactgtg agctgctgtg gctgcggcgg ctggcgcggc cggacgacct ggaaacgtgc
961 gcctccccgc ccggcctggc cggccgctac ttctgggcag tgcccgaggg cgagttctcc
1021 tgtgagccgc ccctcattgc ccgccacacg cagcgcctct gggtgctgga aggccagcgg
1081 gccacgctgc ggtgccgggc cctgggtgac cccgcgccta ccatgcactg ggtcggtcct
1141 gacgaccggt tggttggcaa ctcctcccga gcccgggctt tccccaacgg gaccttagag
1201 attggggtga ccggcgctgg ggacgctggg ggctacacct gcatcgccac caaccctgct
1261 ggtgaggcca cagcccgagt agaactgcgg gtgctggcct tgccccatgg tgggaacagc
1321 agtgccgagg ggggccgccg cctggcctgg gagtccctcc ctggttttta ttctcagtac
1381 ctcaggctcc cctgtgtact tggaggggca gggagccctt tcctcggttc tggcctccag
1441 accagggtaa gggcaggccc ctccaacagg tgctcacagc caccgaggca ggggctgcag
1501 ccacccactg ggagtcttgt ttttatttat aataaaattg ttggggacac ctcaaaaaaa
1561 aaaaaaaaaa a
//