LOCUS BC071839 1980 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens aldehyde dehydrogenase 2 family (mitochondrial), mRNA
(cDNA clone MGC:88499 IMAGE:5477768), complete cds.
ACCESSION BC071839
VERSION BC071839.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1980)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1980)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: g Column: 16.
FEATURES Location/Qualifiers
source 1..1980
/db_xref="H-InvDB:HIT000264653"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88499 IMAGE:5477768"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1980
/gene="ALDH2"
/gene_synonym="ALDH-E2"
/gene_synonym="ALDHI"
/gene_synonym="ALDM"
/gene_synonym="MGC1806"
/db_xref="GeneID:217"
/db_xref="HGNC:HGNC:404"
/db_xref="MIM:100650"
CDS 6..1559
/gene="ALDH2"
/gene_synonym="ALDH-E2"
/gene_synonym="ALDHI"
/gene_synonym="ALDM"
/gene_synonym="MGC1806"
/codon_start=1
/product="aldehyde dehydrogenase 2 family (mitochondrial)"
/protein_id="AAH71839.1"
/db_xref="GeneID:217"
/db_xref="HGNC:HGNC:404"
/db_xref="MIM:100650"
/translation="MLRAAARFGPRLGRRLLSAAATQAVPAPNQQPEVFCNQIFINNE
WHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRG
RLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT
IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA
LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS
SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDE
FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAA
DRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT
KDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV
TVKVPQKNS"
BASE COUNT 484 a 507 c 558 g 431 t
ORIGIN
1 ctgcgatgtt gcgcgctgcc gcccgcttcg ggccccgcct gggccgccgc ctcttgtcag
61 ccgccgccac ccaggccgtg cctgccccca accagcagcc cgaggtcttc tgcaaccaga
121 ttttcataaa caatgaatgg cacgatgccg tcagcaggaa aacattcccc accgtcaatc
181 cgtccactgg agaggtcatc tgtcaggtag ctgaagggga caaggaagat gtggacaagg
241 cagtgaaggc cgcccgggcc gccttccagc tgggctcacc ttggcgccgc atggacgcat
301 cacacagggg ccggctgctg aaccgcctgg ccgatctgat cgagcgggac cggacctacc
361 tggcggcctt ggagaccctg gacaatggca agccctatgt catctcctac ctggtggatt
421 tggacatggt cctcaaatgt ctccggtatt atgccggctg ggctgataag taccacggga
481 aaaccatccc cattgacgga gacttcttca gctacacacg ccatgaacct gtgggggtgt
541 gcgggcagat cattccgtgg aatttcccgc tcctgatgca agcatggaag ctgggcccag
601 ccttggcaac tggaaacgtg gttgtgatga aggtagctga gcagacaccc ctcaccgccc
661 tctatgtggc caacctgatc aaggaggctg gctttccccc tggtgtggtc aacattgtgc
721 ctggatttgg ccccacggct ggggccgcca ttgcctccca tgaggatgtg gacaaagtgg
781 cattcacagg ctccactgag attggccgcg taatccaggt tgctgctggg agcagcaacc
841 tcaagagagt gaccttggag ctggggggga agagccccaa catcatcatg tcagatgccg
901 atatggattg ggccgtggaa caggcccact tcgccctgtt cttcaaccag ggccagtgct
961 gctgtgccgg ctcccggacc ttcgtgcagg aggacatcta tgatgagttt gtggagcgga
1021 gcgttgcccg ggccaagtct cgggtggtcg ggaacccctt tgatagcaag accgagcagg
1081 ggccgcaggt ggatgaaact cagtttaaga agatcctcgg ctacatcaac acggggaagc
1141 aagagggggc gaagctgctg tgtggtgggg gcattgctgc tgaccgtggt tacttcatcc
1201 agcccactgt gtttggagat gtgcaggatg gcatgaccat cgccaaggag gagatcttcg
1261 ggccagtgat gcagatcctg aagttcaaga ccatagagga ggttgttggg agagccaaca
1321 attccacgta cgggctggcc gcagctgtct tcacaaagga tttggacaag gccaattacc
1381 tgtcccaggc cctccaggcg ggcactgtgt gggtcaactg ctatgatgtg tttggagccc
1441 agtcaccctt tggtggctac aagatgtcgg ggagtggccg ggagttgggc gagtacgggc
1501 tgcaggcata cactgaagtg aaaactgtca cagtcaaagt gcctcagaag aactcataag
1561 aatcatgcaa gcttcctccc tcagccattg atggaaagtt cagcaagatc agcaacaaaa
1621 ccaagaaaaa tgatccttgc gtgctgaata tctgaaaaga gaaatttttc ctacaaaatc
1681 tcttgggtca agaaagttct agaatttgaa ttgataaaca tggtgggttg gctgagggta
1741 agagtatatg aggaaccttt taaacgacaa caatactgct agctttcagg atgattttta
1801 aaaaatagat tcaaatgtgt tatcctctct ctgaaacgct tcctataact cgagtttata
1861 ggggaagaaa aagctattgt ttacaattat atcaccatta aggcaactgc tacaccctgc
1921 tttgtattct gggctaagat tcattaaaaa ctagctgctc ttaaaaaaaa aaaaaaaaaa
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