LOCUS BC071835 1955 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens colony stimulating factor 2 receptor, alpha,
low-affinity (granulocyte-macrophage), mRNA (cDNA clone MGC:88495
IMAGE:4650755), complete cds.
ACCESSION BC071835
VERSION BC071835.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1955)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1955)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: d Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27437035.
FEATURES Location/Qualifiers
source 1..1955
/db_xref="H-InvDB:HIT000264650_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88495 IMAGE:4650755"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1955
/gene="CSF2RA"
/gene_synonym="CD116"
/gene_synonym="CDw116"
/gene_synonym="CSF2RAX"
/gene_synonym="CSF2RAY"
/gene_synonym="CSF2RX"
/gene_synonym="CSF2RY"
/gene_synonym="GM-CSF-R-alpha"
/gene_synonym="GMCSFR"
/gene_synonym="GMR"
/gene_synonym="MGC3848"
/gene_synonym="MGC4838"
/db_xref="GeneID:1438"
/db_xref="MIM:425000"
CDS 293..1495
/gene="CSF2RA"
/gene_synonym="CD116"
/gene_synonym="CDw116"
/gene_synonym="CSF2RAX"
/gene_synonym="CSF2RAY"
/gene_synonym="CSF2RX"
/gene_synonym="CSF2RY"
/gene_synonym="GM-CSF-R-alpha"
/gene_synonym="GMCSFR"
/gene_synonym="GMR"
/gene_synonym="MGC3848"
/gene_synonym="MGC4838"
/codon_start=1
/product="CSF2RA protein"
/protein_id="AAH71835.1"
/db_xref="GeneID:1438"
/db_xref="MIM:425000"
/translation="MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRT
MNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQ
RGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRR
REIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERF
NPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGD
LENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVG
TLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREE
VLTVKEIT"
BASE COUNT 565 a 475 c 476 g 439 t
ORIGIN
1 ctccgagaga agaaaagcag gtggaaggag aggaagcgga tgccgtgggg tttacagcag
61 gaaaatccgt ggagacagca gatccgagaa gcggcgatgt ttgcgtagaa ccctgtcagc
121 tgagccatga cccatgaacc atggaagctt gactctagat tgaccatctt gagatgccaa
181 agatgtccac gtcctaatcc catgtgggag acagaataat ggccctgcag accttcccag
241 ctggccatga cccctcattt gaccagctct tcccttctct ctgaccagca ccatgcttct
301 cctggtgaca agccttctgc tctgtgagtt accacaccca gcattcctcc tgatcccaga
361 gaaatcggat ctgcgaacag tggcaccagc ctctagtctc aatgtgaggt ttgactccag
421 gacgatgaat ttaagctggg actgccaaga aaacacaacc ttcagcaagt gtttcttaac
481 tgacaagaag aacagagtcg tggaacccag gctcagtaac aacgaatgtt cgtgcacatt
541 tcgtgaaatt tgtctgcatg aaggagtcac atttgaggtt cacgtgaata ctagtcaaag
601 aggatttcaa cagaaactgc tttatccaaa ttcaggaagg gagggtaccg ctgctcagaa
661 tttctcctgt ttcatctaca atgcggattt aatgaactgt acctgggcga ggggtccgac
721 ggccccccgt gacgtccagt attttttgta catacgaaac tcaaagagaa ggagggagat
781 ccggtgtcct tattacatac aagactcagg aacccatgtg ggatgtcacc tggataacct
841 gtcaggatta acatctcgca attactttct ggttaacgga accagccgag aaattggcat
901 ccaattcttt gattcacttt tggacacaaa gaaaatagaa cgattcaacc ctcccagcaa
961 tgtcaccgta cgttgcaaca cgacgcactg cctcgtacgg tggaaacagc ccaggaccta
1021 tcagaagctg tcgtacctgg actttcagta ccagctggac gtccacagaa agaataccca
1081 gcctggcacg gaaaacctac tgattaatgt ttctggtgat ttggaaaata gatacaactt
1141 tccaagctct gagcccagag caaaacacag tgtgaagatc agagctgcag acgtccgcat
1201 cttgaattgg agctcctgga gtgaagccat tgaatttggt tctgacgacg ggaacctcgg
1261 ctctgtgtac atttatgtgc tcctaatcgt aggaaccctt gtctgtggca tcgtcctcgg
1321 cttcctcttt aaaaggttcc ttaggataca gcggctgttc ccaccagttc cacagatcaa
1381 agacaaactg aatgataacc atgaggtgga agacgagatc atctgggagg aattcacccc
1441 agaggaaggg aaaggctacc gcgaagaggt cttgaccgtg aaggaaatta cctgagaccc
1501 agaaggtgta ggaatggcat ggacatctcc gcctccgcga cacgggggaa ctgttttctt
1561 gatgatgctg tgaaccttta tatcattttc tatgttttta tttaaaaaca tgacatttgg
1621 ggccaggcgc ggtggctcac gcctgtaatc ccagcacttt gggaggccaa ggcaggcgga
1681 tcacctgagg tcaggagttc aagaccagcc tgcccaacat ggtgaaaccc catctggact
1741 aaaaatgcag aaatttaccc aggcacggcg gcggacgccc atcatcccag ctacttggga
1801 ggctgaggca ggagaattgc ttgaacccgt gaggcggagg ttgtagtgag ccaagatcgc
1861 accattgcac accaacctgg gtgacagagc aagattgcat ctcaaaacaa acaataataa
1921 taaataataa aaacctgaaa aaaaaaaaaa aaaaa
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