LOCUS BC071750 1420 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens structural maintenance of chromosomes 2, mRNA (cDNA
clone IMAGE:6654356), partial cds.
ACCESSION BC071750
VERSION BC071750.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1420)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1420)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: l Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453590.
FEATURES Location/Qualifiers
source 1..1420
/db_xref="H-InvDB:HIT000264570"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6654356"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1420
/gene="SMC2"
/gene_synonym="CAP-E"
/gene_synonym="CAPE"
/gene_synonym="hCAP-E"
/db_xref="GeneID:10592"
/db_xref="HGNC:HGNC:14011"
/db_xref="MIM:605576"
CDS 351..>1420
/gene="SMC2"
/gene_synonym="CAP-E"
/gene_synonym="CAPE"
/gene_synonym="hCAP-E"
/codon_start=1
/product="SMC2 protein"
/protein_id="AAH71750.1"
/db_xref="GeneID:10592"
/db_xref="HGNC:HGNC:14011"
/db_xref="MIM:605576"
/translation="MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDS
ICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEVHDEIT
VTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE
ILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYL
EYQKVMREIEHLSRLYIAYQFLLAEDTKVRSAEELKEMQDKVIKLQEELSENDKKIKA
LNHEIEELEKRKDKETGGILRSLEDALAEAQRVNTKSQSAFDLKKKNLACEESKRKEL
EKNMVEDSKTLAAKKKKKKKKK"
BASE COUNT 514 a 237 c 326 g 343 t
ORIGIN
1 ggggcgcggg gcgcgggggc tgtagggagg gggaccagtg gcagagggac cttaggtgat
61 ccttagaaat aaaggctagc ttctgttcga ccttggagta gggcgaagag gtgtagacag
121 gcctggagaa gcgaggtaaa agcctgagta aaagcaagaa gttggagaat atgagataca
181 tctcatctct agtaaatact taaatgactt cccctcctcc cggagtcaag cacaattcgg
241 ggatgcaatg acggacgtag gtgaagacac tgcgggaact tacagacaaa actggtttgt
301 ggcctgtttg attcctgtca gaggtttgct gacccaagac agtatcgaaa atgcatatta
361 agtcaattat tctagaggga ttcaagtcct atgctcagag gaccgaagtc aatggttttg
421 accccctctt caatgctatc actggcttaa atggtagtgg gaaatccaac atattggact
481 ccatctgctt tttgctgggc atctccaacc tgtctcaggt tcgggcttct aatttacaag
541 atttagttta caaaaatggg caggctggta ttaccaaagc ctctgtgtca atcacttttg
601 ataattctga caaaaagcaa agtcctttag gatttgaggt tcatgatgaa atcacagtaa
661 caaggcaggt ggttattggt ggtagaaata aatatttaat caatggagtc aatgccaaca
721 acaccagagt acaggatctc ttctgttctg ttggccttaa tgttaacaac cctcactttc
781 tcatcatgca gggccgaatt acaaaagtat tgaatatgaa acctccagag attttatcca
841 tgatagaaga agcagctgga accaggatgt atgaatacaa aaaaatagct gcacagaaaa
901 ctatagaaaa aaaggaggct aagctgaaag aaattaagac gatacttgaa gaagagatta
961 ctccaaccat tcaaaaatta aaagaggaaa gatcgtccta cttggagtac caaaaagtaa
1021 tgagagaaat agaacatttg agtcgtttat atattgctta tcagtttttg ctggctgaag
1081 ataccaaagt acgctcagct gaggaattaa aagaaatgca agataaagtt ataaagcttc
1141 aggaagaatt gtctgagaat gataaaaaaa taaaagcact taatcatgaa atagaagaat
1201 tggaaaaaag aaaagataag gaaactggag gtatacttcg atctttagaa gatgctcttg
1261 cagaggctca gcgagttaat actaaatctc aaagcgcatt tgatctcaag aagaaaaatc
1321 tggcatgtga ggaaagcaaa cgcaaagagc tggaaaaaaa tatggttgag gactcaaaaa
1381 ctttagcagc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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