LOCUS BC071717 1119 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens small nuclear ribonucleoprotein polypeptide A', mRNA
(cDNA clone MGC:88013 IMAGE:4514975), complete cds.
ACCESSION BC071717
VERSION BC071717.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1119)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1119)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: e Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50593001.
FEATURES Location/Qualifiers
source 1..1119
/db_xref="H-InvDB:HIT000264538"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88013 IMAGE:4514975"
/tissue_type="Bladder, transitional cell papilloma"
/clone_lib="NIH_MGC_93"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1119
/gene="SNRPA1"
/db_xref="GeneID:6627"
/db_xref="HGNC:HGNC:11152"
/db_xref="MIM:603521"
CDS 13..780
/gene="SNRPA1"
/codon_start=1
/product="small nuclear ribonucleoprotein polypeptide A'"
/protein_id="AAH71717.1"
/db_xref="GeneID:6627"
/db_xref="HGNC:HGNC:11152"
/db_xref="MIM:603521"
/translation="MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQF
DAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVE
LGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEK
MFKGKRGAQLAKDIARRSKTFNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVE
RLKGLLQSGQIPGRERRSGPTDDGEEEMEEDTVTNGS"
BASE COUNT 432 a 190 c 253 g 244 t
ORIGIN
1 ggaggctgca ggatggtcaa gctgacggcg gagctgatcg agcaggcggc gcagtacacc
61 aacgcggtgc gcgaccggga gctggacctc cgggggtata aaattcccgt cattgaaaat
121 ctaggtgcta cgttagacca gtttgatgct attgattttt ctgacaatga gatcaggaaa
181 ctggatggtt ttcctttgtt gagaagactg aaaacattgt tagtgaacaa caacagaata
241 tgccgtatag gtgagggact tgatcaggct ctgccctgtc tgacagaact cattctcacc
301 aataatagtc tcgtggaact gggtgatctg gaccctctgg catctctcaa atcgctgact
361 tacctaagta tcctaagaaa tccggtaacc aataagaagc attacagatt gtatgtgatt
421 tataaagttc cgcaagtcag agtactggat ttccagaaag tgaaactaaa agagcgtcag
481 gaagcagaga aaatgttcaa gggcaaacgg ggtgcacagc ttgcaaagga tattgccagg
541 agaagcaaaa cttttaatcc aggtgctggt ttgccaactg acaaaaagaa aggtgggcca
601 tctccagggg atgtagaagc aatcaagaat gccatagcaa atgcttcaac tctggctgaa
661 gtggagaggc tgaaggggtt gctgcagtct ggtcagatcc ctggcagaga acgcagatca
721 gggcccactg atgatggtga agaagagatg gaagaagaca cagtcacaaa cgggtcctga
781 gcagtgaggc agatgtataa taataggccc tcttggaaca agtcttgctt ttcgaacatg
841 gtataatagc cttgtttgtg ttagcaaagt ggaatctatc agcattgttg aaatgcttaa
901 gactgctgct gataattttg taatataagt tttgaaatct aaatgtcaat tttctacaaa
961 ttataaaaat aaactccact cactatgcta ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1081 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//