LOCUS BC071703 1959 bp mRNA linear HUM 18-JAN-2007
DEFINITION Homo sapiens gap junction protein, beta 2, 26kDa, mRNA (cDNA clone
MGC:87974 IMAGE:5182353), complete cds.
ACCESSION BC071703
VERSION BC071703.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1959)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1959)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: i Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42558282.
FEATURES Location/Qualifiers
source 1..1959
/db_xref="H-InvDB:HIT000264524"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87974 IMAGE:5182353"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1959
/gene="GJB2"
/gene_synonym="CX26"
/gene_synonym="HID"
/gene_synonym="KID"
/gene_synonym="NSRD1"
/gene_synonym="PPK"
/db_xref="GeneID:2706"
/db_xref="HGNC:HGNC:4284"
/db_xref="MIM:121011"
CDS 145..825
/gene="GJB2"
/gene_synonym="CX26"
/gene_synonym="HID"
/gene_synonym="KID"
/gene_synonym="NSRD1"
/gene_synonym="PPK"
/codon_start=1
/product="gap junction protein, beta 2, 26kDa"
/protein_id="AAH71703.1"
/db_xref="GeneID:2706"
/db_xref="HGNC:HGNC:4284"
/db_xref="MIM:121011"
/translation="MDWGTLQTILGGVNKHSTSIGKIWLTILFIFRIMILVVAAKEVW
GDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEK
KRKFIKGEIKSGFKDIEEIKTQKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDG
FSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYC
SGKSKKPV"
BASE COUNT 527 a 452 c 467 g 513 t
ORIGIN
1 ccgactcgga gcccctcggc ggcgcccggc ccaggacccg cctaggagcg caggagcccc
61 agcgcagaga ccccaacgcc gagacccccg ccccggcccc gccgcgcttc ctcccgacgc
121 agagcaaacc gcccagagta gaagatggat tggggcacgc tgcagacgat cctggggggt
181 gtgaacaaac actccaccag cattggaaag atctggctca ccatcctctt catttttcgc
241 attatgatcc tcgttgtggc tgcaaaggag gtgtggggag atgagcaggc cgactttgtc
301 tgcaacaccc tgcagccagg ctgcaagaac gtgtgctacg atcactactt ccccatctcc
361 cacatccggc tatgggccct gcagctgatc ttcgtgtcca cgccagcgct cctagtggcc
421 atgcacgtgg cctaccggag acatgagaag aagaggaagt tcatcaaggg ggagataaag
481 agtggattta aggacatcga ggagatcaaa acccagaagg tccgcatcga aggctccctg
541 tggtggacct acacaagcag catcttcttc cgggtcatct tcgaagccgc cttcatgtac
601 gtcttctatg tcatgtacga cggcttctcc atgcagcggc tggtgaagtg caacgcctgg
661 ccttgtccca acactgtgga ctgctttgtg tcccggccca cggagaagac tgtcttcaca
721 gtgttcatga ttgcagtgtc tggaatttgc atcctgctga atgtcactga attgtgttat
781 ttgctaatta gatattgttc tgggaagtca aaaaagccag tttaacgcat tgcccagttg
841 ttagattaag aaatagacag catgagaggg atgaggcaac ccgtgctcag ctgtcaaggc
901 tcagtcgcta gcatttccca acacaaagat tctgacctta aatgcaacca tttgaaaccc
961 ctgtaggcct caggtgaaac tccagatgcc acaatggagc tctgctcccc taaagcctca
1021 aaacaaaggc ctaattctat gcctgtctta attttctttc acttaagtta gttccactga
1081 gaccccaggc tgttaggggt tattggtgta aggtactttc atattttaaa cagaggatat
1141 cggcatttgt ttctttctct gaggacaaga gaaaaaagcc aggttccaca gaggacacag
1201 agaaggtttg ggtgtcctcc tggggttctt tttgccaact ttccccacgt taaaggtgaa
1261 cattggttct ttcatttgct ttggaagttt taatctctaa cagtggacaa agttaccagt
1321 gccttaaact ctgttacact ttttggaagt gaaaactttg tagtatgata ggttattttg
1381 atgtaaagat gttctggata ccattatatg ttccccctgt ttcagaggct cagattgtaa
1441 tatgtaaatg gtatgtcatt cgctactatg atttaatttg aaatatggtc ttttggttat
1501 gaatactttg cagcacagct gagaggctgt ctgttgtatt cattgtggtc atagcaccta
1561 acaacattgt agcctcaatc gagtgagaca gactagaagt tcctagtgat ggcttatgat
1621 agcaaatggc ctcatgtcaa atatttagat gtaattttgt gtaagaaata cagactggat
1681 gtaccaccaa ctactacctg taatgacagg cctgtccaac acatctccct tttccatgac
1741 tgtggtagcc agcatcggaa agaacgctga tttaaagagg tcgcttggga attttattga
1801 cacagtacca tttaatgggg aggacaaaat ggggcagggg agggagaagt ttctgtcgtt
1861 aaaaacagat ttggaaagac tggactctaa attctgttga ttaaagatga gctttgtcta
1921 cttcaaaagt taaaaaaaaa aaaaaaaaaa aaaaaaaaa
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