LOCUS BC071680 2090 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens TBC1 domain family, member 3C, mRNA (cDNA clone
MGC:87891 IMAGE:5165385), complete cds.
ACCESSION BC071680
VERSION BC071680.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2090)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2090)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: g Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48949891.
FEATURES Location/Qualifiers
source 1..2090
/db_xref="H-InvDB:HIT000264504_05"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87891 IMAGE:5165385"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2090
/gene="TBC1D3C"
/gene_synonym="MGC44903"
/db_xref="GeneID:414060"
/db_xref="HGNC:HGNC:24889"
CDS 101..1750
/gene="TBC1D3C"
/gene_synonym="MGC44903"
/codon_start=1
/product="TBC1 domain family, member 3C"
/protein_id="AAH71680.1"
/db_xref="GeneID:414060"
/db_xref="HGNC:HGNC:24889"
/translation="MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNN
NVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGM
PMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFR
DRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASER
HSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDG
ISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWAR
DEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPG
PPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFL
QWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAA
PSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF"
BASE COUNT 525 a 578 c 587 g 400 t
ORIGIN
1 cagttacaca caggcagtgg tatctgtgag cagctctgtg gactcaaagg ttttctccct
61 gagaggcatg acccaggcca gctgattcat cagaatcagg atggacgtgg tagaggtcgc
121 gggcagttgg tgggcacaag agcgagagga catcattatg aaatacgaaa agggacaccg
181 agctgggctg ccagaggaca aggggcctaa gccttttcga agctacaaca acaacgtcga
241 tcatttgggg attgtacatg agacggagct gcctcctctg actgcgcggg aggcgaagca
301 aattcggcgg gagatcagcc gaaagagcaa gtgggtggat atgctgggag actgggagaa
361 atacaaaagc agcagaaagc tcatagatcg agcgtacaag ggaatgccca tgaacatccg
421 gggcccgatg tggtcagtcc tcctgaacat tgaggaaatg aagttgaaaa accccggaag
481 ataccagatc atgaaggaga agggcaagag gtcatctgag cacatccagc gcatcgaccg
541 ggacataagc gggacattaa ggaagcatat gttcttcagg gatcgatacg gaaccaagca
601 gcgggaacta ctccacatcc tcctggcata tgaggagtat aacccggagg tgggctactg
661 cagggacctg agccacatcg ccgccttgtt cctcctctat cttcctgagg aggatgcatt
721 ctgggcactg gtgcagctgc tggccagtga gaggcactcc ctgcagggat ttcacagccc
781 aaatggcggg accgtccagg ggctccaaga ccaacaggag catgtggtag ccacgtcaca
841 acccaagacc atggggcatc aggacaagaa agatctatgt gggcagtgtt ccccgttagg
901 ctgcctcatc cggatattga ttgacgggat ctctctcggg ctcaccctgc gcctgtggga
961 cgtgtatctg gtagaaggcg aacaggcgtt gatgccgata acaagaatcg cctttaaggt
1021 tcagcagaag cgcctcacga agacgtccag gtgtggcccg tgggcacgtt tttgcaaccg
1081 gttcgttgat acctgggcca gggatgagga cactgtgctc aagcatctta gggcctctat
1141 gaagaaacta acaagaaagc agggggacct gccaccccca gccaaacccg agcaagggtc
1201 gtcggcatcc aggcctgtgc cggcttcacg tggcgggaag accctctgca agggggacag
1261 gcaggcccct ccaggcccac cagcccggtt cccgcggccc atttggtcag cttccccgcc
1321 acgggcacct cgttcttcca caccctgtcc tggtggggct gtccgggaag acacctaccc
1381 tgtgggcact cagggtgtgc ccagcccggc cctggctcag ggaggacctc agggttcctg
1441 gagattcctg cagtggaact ccatgccccg cctcccaacg gacctggacg tagagggccc
1501 ttggttccgc cattatgatt tcagacagag ctgctgggtc cgtgccatat cccaggagga
1561 ccagctggcc ccctgctggc aggctgaaca ccctgcggag cgggtgagat cggctttcgc
1621 tgcacccagc actgattccg accagggcac ccccttcaga gctagggacg aacagcagtg
1681 tgctcccacc tcagggcctt gcctctgcgg cctccacttg gaaagttctc agttccctcc
1741 aggcttctag aagcatctgg gccagggctc atggctggat aatttcccta ggcttaacaa
1801 cccaagcaag cttcgcatcc tcgttttatt tttggttaaa cttatgaaaa tgtattaaga
1861 aagagtgcag ctcgagagag attcagagat ggaacacacc agaccccaga tcacaaagcc
1921 aaccatgccc agcccctccc agcaccccca gccccacgac catcgttctg aattctgacg
1981 acaccgtgag cctgcctttg tacttcaaac tcatggaagg ataaccacct tcatgttttg
2041 aaataaatgt ttcctgttga aatgaaaaaa aaaaaaaaaa aaaaaaaaaa
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