LOCUS BC071580 5112 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens SEC31-like 2 (S. cerevisiae), mRNA (cDNA clone
IMAGE:5295715).
ACCESSION BC071580
VERSION BC071580.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5112)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5112)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: c Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38149839.
FEATURES Location/Qualifiers
source 1..5112
/db_xref="H-InvDB:HIT000264409"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5295715"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1158 a 1392 c 1338 g 1224 t
ORIGIN
1 ccggctccgc gcgagagccc tgccagagga gcggctccgg ccgccgcgcc tgacccttgt
61 ccggggtctt ccgcacagtg ggctgagggc catgtcagtt ttctgccacc tacaggatag
121 accatgaagc tgaaggaact tgagcggcca gctgtccagg catggagccc agccagccaa
181 taccctttgt atctggccac aggaacatct gcccaacagc tagattcctc cttcagcaca
241 aatggcacat tggaaatatt tgaggttgat ttcagggacc cttctctgga cttgaaacac
301 agaggagtcc tttctgcctt gagcagggca acctcctggc ttcaggggcc ggcgattctg
361 aaatcttcat ttgggatctg aataacttga atgtgccgat gaccctggga tccaagtcac
421 agcagcctcc agaggacatc aaggcactgt cttggaaccg gcaagcccaa cacattctgt
481 cttctgctca ccccagtggc aaggcagttg tgtgggatct caggaagaat gaacctatca
541 tcaaagtcag tgatcacagc aacaggatgc actgctcagg cctggcctgg catcctgaca
601 tagccaccca gttagtgctg tgctcagagg atgatcgact tcccgtgatt cagctgtggg
661 acttgcgctt tgcctcctcg cccttgaagg tgctggagag ccacagcagg gggatcttgt
721 cagtgtcatg gagccaggct gatgctgagc tgctgctcac tagtgctaag gacagccaga
781 tcttgtgccg gaacctgggg agcagtgagg tggtatataa gctaccaaca cagagcagct
841 ggtgctttga tgtgcagtgg tgccctcggg acccttcagt gttctctgct gcctccttca
901 acggctggat cagtttgtac tctgtgatgg gtaggagctg ggaagtccag catatgagac
961 aggctgacaa ggtttgaagg gcttggtaga gaatgctgga gggaaggggc tgtctctgtt
1021 tgtgggagag agacatatgg cttgagaagc ggagatattg gagattggga gaccagggcc
1081 cggggtttgg gagggctgca cctttgccct agtgcccatc ttcctgaaag gatgttagtt
1141 tctgccacaa tgtgaagaag gccttcacct tgactcttgt tattggatgg gccctgtagt
1201 atttcaggga ccgtgggacc cctttgctgg gacagttatt tcaagagtat gactcttatc
1261 tttctctctt ctatagatcc attttgtgcc acactccatt gtagactttg aatgtagtag
1321 tctttccaag agcctacttg catgggagtc ccaccctcgc taccactcac ttccccatcc
1381 cctggaatat gggagtctga cctttctagg tcaaattggg tgtctcaagg attcctccca
1441 aaatggagtt tgtaggtgga gttcctgact aaactgccac tttaggatgg cgatgcaggt
1501 gtcttttccc cccagatctc ctcttccttc agcaaaggcc agcctctccc accactgcag
1561 gtgccagagc aagtggcaca agcaccactg atacctcccc tgaaaaaacc ccccaaatgg
1621 attagaagac caacaggtgt ttcatttgct tttggaggga agctggttac ttttggcctc
1681 cccagcaccc ctgcccatct ggtgccacag ccttgctccc gcctagtctt catcagtcaa
1741 gtcaccacag aatctgaatt cctgatgcga tcagctgagc tgcaggaggc cttgggatca
1801 ggaaatctac tgaattactg tcagaacaag agccagcaag ctttactgca aagtgaaaag
1861 atgctgtggc agttcctgaa ggaggagtac tatacctatc aaaggaaatg agcaagtgag
1921 agacctgaag gaagaaagcc cgccagagac agctcaggtg caaggagatg agactataca
1981 tcaggcaggt gaccttagag caagactcca gaatgaaatt cctaaagctt ttaggataca
2041 gtaaggatga gcttcagaag aaggtggcca catggttgaa gagtgacgtg gggctaggtg
2101 agagtcctca gcccaaggga aatgacctca acagtgacag acaacaggcc ttctgcagcc
2161 aggcctccaa acacaccaca aaggaagcct ctgcttcctc agccttcttt gatgagctgg
2221 tccctcagaa catgactcct tgggagatcc ccatcacaaa agatattgat ggactcctaa
2281 gccaggctct cctgcttggg gaactgggtc cggccgtgga gctgtgtctg aaggaggagc
2341 gctttgctga tgccattatc ctggcccagg ctgggggtac agatctgctg aagcaaacac
2401 aggagcgcta cttggccaag aagaaaacca aaatctcctc gcttctagcc tgtgttgtgc
2461 aaaagaattg gaaggatgtg gtgtgtacct gtagcctgaa gaactggaga gaggcactgg
2521 ctttgctact gacatactca ggcacagaga aatttcccga gctctgtgac atgctgggaa
2581 ctcgcatgga acaggagggc agcagggcac taacctccga agccagactc tgttatgtgt
2641 gctcagggag tgtggagcgg ctggtggagt gctgggcaaa atgccaccag gctttgtccc
2701 ccatggctct gcaggacctg atggagaagg tgatggttct taacaggagc ttggagcaac
2761 tgcggggtcc tcatggggtg agcccaggcc ctgccacaac ctacagggtc actcagtatg
2821 ccaacctcct ggcagcccag ggcagcctgg ccactgccat gagctttcta cccagggact
2881 gtgctcagcc accagttcag cagctaagag atcggctttt tcatgctcaa ggttctgctg
2941 tattgggcca acagtctccc cctttcccct tcccccggat tgttgtggga gctaccctcc
3001 actctaaaga gacatcatct tacagattgg gatcccagcc ttctcaccag gtcccaactc
3061 catctccaag gccaagggtt ttcacccctc agtcatcacc agcgatgccc ttggcacctt
3121 cccatcctag cccttatcag ggtcccagga cacagaatat aagtgactac agggcacctg
3181 ggccccaggc catccagcct ttgcctttga gccctggggt aaggcctgct tcatctcagc
3241 cacagctatt aggagggcaa agggtgcaag ttcctaaccc ggtgggattc cctgggacat
3301 ggcctcttcc tggttcccct ctacccatgg catgcccagg catcatgcga cctggctcta
3361 cctccctgcc tgagactcct agactgttcc ctctgcttcc tctgagacca ctaggtcccg
3421 gccgcatggt ctcccacacc ccagcccctc ctgcaagctt ccctgtgcca taccttccag
3481 gggacccagg tgccccatgc tctagtgtcc tcccaaccac tggcatcttg actcctcacc
3541 caggacctca agattcctgg aaagaagccc cagcccccag gggaaacctc cagaggaaca
3601 agctgccaga gacatttatg cccccagcac caattactgc tccagttatg agcctcaccc
3661 ctgagctaca agggattctt ccctcacagc cccctgtctc cagtgtgagt catgctcccc
3721 caggagttcc aggagaactc agcctgcagc ttcagcacct gccacctgag aagatggaaa
3781 ggaaggagct gcccccagag catcagtcct tgaagagcag ctttgaggcg cttctccaac
3841 gctgctccct gtctgcaact gacttaaaga caaaaaggaa gctggaagag gcagcccagc
3901 gtctggagta tctatatgag aagctctgtg aggggacact ctcacctcat gtcgtggctg
3961 ggctccatga ggttgcccga tgtgtggatg caggaagctt tgagcagggc cttgcagtgc
4021 atgcccaggt ggcgggctgt agcagcttca gcgaggtgtc cagcttcatg cctatcctga
4081 aggctgtcct catcatcgct cataagctgc tggtctaaac cgggcagcct ctcttgctag
4141 gaggccactt ctgctgttac ataactcctc cctgcagaag aggggacttc tgcaacagat
4201 tctgtttctt tttcccgact cttttccttg ctgccaggta tgtgatgctg taggcttggc
4261 tccaaaccag ctgagtgcct gctttttact cctttatgtc tggccttcta ggatctgtcc
4321 aagacactct caggcctgga ggcagggcat agaatcagtt cttcactctc cctaatacta
4381 cactctgtaa ggacctgggg caggatatct tctcccccag ggatcttcta tttaagtggc
4441 ttctgagagg gtgaacagga ttgttacttt taagcctacc tctgctgtga cccatcatgt
4501 gggtcttttg tttctccctt ctgtggttta tgagcctgcc cttacctttt ccctgcctct
4561 gacttggtat ttccaggtcc gtatttctct gtagcccagg gtctggggta gagctgactg
4621 ctgttcaccc tttgaacaac tcatggacgt gagggatggg tgctgagcag aaccaagaga
4681 ggaaactttg gcgctgttaa aatggaattt ctcatctgcc ggcattatta agggtgggct
4741 aggttggatg gaaggtgaaa gggatgaact gccttttgct ggaagctgtc ttaggctgtg
4801 agacaggagc aggggaacca cagcctatgg ggaactgccc ttgactccac ctatgttgga
4861 gccttagccc aaggccattc cttctgtgat gataaagccc agttctggaa ttggagccat
4921 attaaggaat gattctcttc cagcgctgct cctcaagggt tgggggtcct tctccctcgc
4981 agccaccaca tgtctcaggg ctaccttctc cgattggatt tgcatttgtg gcactgtctt
5041 tgatgcagtg atgtacttaa tggtgcaata aagctgcttc gatttggaaa aaaaaaaaaa
5101 aaaaaaaaaa aa
//