LOCUS BC070317 1273 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens cytochrome P450, family 2, subfamily C, polypeptide 9,
mRNA (cDNA clone IMAGE:4722940), complete cds.
ACCESSION BC070317
VERSION BC070317.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1273)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1273)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: g Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4503218
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1273
/db_xref="H-InvDB:HIT000264273"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4722940"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1273
/gene="CYP2C9"
/gene_synonym="CPC9"
/gene_synonym="CYP2C"
/gene_synonym="CYP2C10"
/gene_synonym="P450 MP-4"
/gene_synonym="P450 PB-1"
/gene_synonym="P450IIC9"
/db_xref="GeneID:1559"
/db_xref="MIM:601130"
CDS 23..511
/gene="CYP2C9"
/gene_synonym="CPC9"
/gene_synonym="CYP2C"
/gene_synonym="CYP2C10"
/gene_synonym="P450 MP-4"
/gene_synonym="P450 PB-1"
/gene_synonym="P450IIC9"
/codon_start=1
/product="CYP2C9 protein"
/protein_id="AAH70317.1"
/db_xref="GeneID:1559"
/db_xref="MIM:601130"
/translation="MDSLVVLVLCLSCLLLLSLWRQSSGRGKLPPGPTPLPVIGNILQ
IGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPL
AERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDCVQEEARCLVEELRKTK
GG"
BASE COUNT 357 a 234 c 276 g 406 t
ORIGIN
1 ttaacaagaa gagaaggctt caatggattc tcttgtggtc cttgtgctct gtctctcatg
61 tttgcttctc ctttcactct ggagacagag ctctgggaga ggaaaactcc ctcctggccc
121 cactcctctc ccagtgattg gaaatatcct acagataggt attaaggaca tcagcaaatc
181 cttaaccaat ctctcaaagg tctatggccc tgtgttcact ctgtattttg gcctgaaacc
241 catagtggtg ctgcatggat atgaagcagt gaaggaagcc ctgattgatc ttggagagga
301 gttttctgga agaggcattt tcccactggc tgaaagagct aacagaggat ttggaattgt
361 tttcagcaat ggaaagaaat ggaaggagat ccggcgtttc tccctcatga cgctgcggaa
421 ttttgggatg gggaagagga gcattgagga ctgtgttcaa gaggaagccc gctgccttgt
481 ggaggagttg agaaaaacca agggtgggtg accctactcc atatcactga ccttactgga
541 ctactatctt ctctactgac attcttggaa acatttcagg ggtggccata tctttcatta
601 tgagtcctgg ttgttagctc atgtgaagcg ggggtttgaa gctgagagcc aagggaattt
661 gcacatattt gtgctgtgtg tgtacaggca tgattgtgca tacagtgtgg gtataaaagg
721 ttcatttaat cccatgttct cctgaacttt gcttttttgc tttcaaataa gaaatgatga
781 atatagattt tgagttcatt ttttgaaaga gttaaagagc agtgtttttc ccattaccta
841 ttccagaaca tgtcaccaga gaatacttga caagtcgaca tggtgggaat ggccctatca
901 tacccatatg gagcatgaac caaatggcat gtgcttttat ttaattggac tgtgtttgta
961 cggtcagcct cactgacttc tctggggttt cttttaggcc cgtgcttgcc attctggcca
1021 gtaatgacat tctacagttt ttattgctta ggcatatctt agtgcagttc tcatcaatta
1081 ttatttctct gtaaacacag cattatttta aaaatagtat taattatttc ttgttactgt
1141 attgatttat atattttcag taaatacatc ctgtagcata attctgtgaa atacccaaat
1201 gtcaatttat aaaatgattt atttaacaag attttactta ttagcaaaaa aaaaaaaaaa
1261 aaaaaaaaaa aaa
//