LOCUS BC070302 1707 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens amylase, alpha 1A (salivary), mRNA (cDNA clone
IMAGE:30330335), partial cds.
ACCESSION BC070302
VERSION BC070302.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1707)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1707)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: o Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21359830.
FEATURES Location/Qualifiers
source 1..1707
/db_xref="H-InvDB:HIT000264260_06"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30330335"
/tissue_type="Glandular pool- thyroid, parathyroid,
adrenal cortex, pineal gland, submandibular gland."
/clone_lib="NIH_MGC_184"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1707
/gene="AMY1A"
/gene_synonym="AMY1B"
/db_xref="GeneID:276"
/db_xref="HGNC:HGNC:474"
/db_xref="MIM:104700"
CDS 221..>1707
/gene="AMY1A"
/gene_synonym="AMY1B"
/codon_start=1
/product="AMY1A protein"
/protein_id="AAH70302.1"
/db_xref="GeneID:276"
/db_xref="HGNC:HGNC:474"
/db_xref="MIM:104700"
/translation="MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECE
RYLAPKGFGGVQVSPPNENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCN
NVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGS
GDIENYNDATQVRDCRLSGLLDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMW
PGDIKAILDKLHNLNSNWFPEGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAK
LGTVIRKWNGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGASILTFWDAR
LYKMAVGFMLAHPYGFTRVMSSYRWPRYFENGKDVNDWVGPPNDNGVTKEVTINPDTT
CGNDWVCEHRWRQIRNMVNFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWT
FSLTLQTGLPAGTYCDVISGDKINGNCTGIKIYVSAKKKKKKKKK"
BASE COUNT 502 a 298 c 419 g 488 t
ORIGIN
1 gatttatcta gaggctggga agggctcctg aaccagttgt ttccgtcttg tcggtctgtc
61 agggttggaa agtccaagcc ataggaccca gtttcctttc ttagcttacg ttatctacca
121 gagcaccgtg ggctgttact tgccttgagt tggaagcggt tcgcatttat accggaatat
181 aaatagtttc tggaaaggac actgacaact tcaaagcaaa atgaagctct tttggttgct
241 tttcaccatt gggttctgct gggctcagta ttcctcaaat acacaacaag gacgaacatc
301 tattgttcat ctgtttgaat ggcgatgggt tgatattgct cttgaatgtg agcgatattt
361 agctcccaag ggatttggag gggttcaggt ctctccacca aatgaaaatg ttgccattca
421 caaccctttc agaccttggt gggaaagata ccaaccagtt agctataaat tatgcacaag
481 atctggaaat gaagatgaat ttagaaacat ggtgactaga tgcaacaatg ttggggttcg
541 tatttatgtg gatgctgtaa ttaatcatat gtgtggtaat gctgtgagtg caggaacaag
601 cagtacctgt ggaagttact tcaaccctgg aagtagggac tttccagcag tcccatattc
661 tggatgggat tttaatgatg gtaaatgtaa aactggaagt ggagatatcg agaactataa
721 tgatgctact caggtcagag attgtcgtct gtctggtctt ctcgatcttg cactggggaa
781 ggattatgtg cgttctaaga ttgccgaata tatgaaccat ctcattgaca ttggtgttgc
841 agggttcaga attgatgctt ccaagcacat gtggcctgga gacataaagg caattttgga
901 caaactgcat aatctaaaca gtaactggtt cccggaaggt agtaaacctt tcatttacca
961 ggaggtaatt gatctgggtg gtgagccaat taaaagcagt gactactttg gtaatggccg
1021 ggtgacagaa ttcaagtatg gtgcaaaact cggcacagtt attcgcaagt ggaatggaga
1081 gaagatgtct tacttaaaga actggggaga aggttggggt ttcatgcctt ctgacagagc
1141 gcttgtcttt gtggataacc atgacaatca acgaggacat ggcgctggag gagcctctat
1201 acttaccttc tgggatgcta ggctgtacaa aatggcagtt ggatttatgc ttgctcatcc
1261 ttatggattt acacgagtaa tgtcaagcta ccgttggcca agatattttg aaaatggaaa
1321 agatgttaat gattgggttg ggccaccaaa tgataatgga gtaactaaag aagttactat
1381 taatccagac actacttgtg gcaatgactg ggtctgtgaa catcgatggc gccaaataag
1441 gaacatggtt aatttccgca atgtagtgga tggccagcct tttacaaact ggtatgataa
1501 tgggagcaac caagtggctt ttgggagagg aaacagagga ttcattgttt tcaacaatga
1561 tgactggaca ttttctttaa ctttgcaaac tggtcttcct gctggcacat actgtgatgt
1621 catttctgga gataaaatta atggcaactg cacaggcatt aaaatctacg tttctgcaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaa
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