LOCUS BC070297 1181 bp mRNA linear HUM 11-MAY-2004
DEFINITION Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA
(cDNA clone MGC:88292 IMAGE:4282630), complete cds.
ACCESSION BC070297
VERSION BC070297.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1181)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1181)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: c Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5031748.
FEATURES Location/Qualifiers
source 1..1181
/db_xref="H-InvDB:HIT000264255"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88292 IMAGE:4282630"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1181
/gene="HMGN2"
/gene_synonym="HMG17"
/gene_synonym="MGC5629"
/db_xref="GeneID:3151"
/db_xref="MIM:163910"
CDS 54..326
/gene="HMGN2"
/gene_synonym="HMG17"
/gene_synonym="MGC5629"
/codon_start=1
/product="HMGN2 protein"
/protein_id="AAH70297.1"
/db_xref="GeneID:3151"
/db_xref="MIM:163910"
/translation="MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKA
PAKKGEKVPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGDAK"
BASE COUNT 359 a 233 c 269 g 320 t
ORIGIN
1 gaagaagagg cgagaacgac ccccggaccg accaaagccc gcgcgccgcc accatgccca
61 agagaaaggc tgaaggggat gctaagggag ataaagcaaa ggtgaaggac gaaccacaga
121 gaagatccgc gaggttgtct gctaaacctg ctcctccaaa gccagagccc aagcctaaaa
181 aggcccctgc aaagaaggga gagaaggtac ccaaagggaa aaagggaaaa gctgatgctg
241 gcaaggaggg gaataaccct gcagaaaatg gagatgccaa aacagaccag gcacagaaag
301 ctgaaggtgc tggagatgcc aagtgaagtg tgtgcatttt tgataactgt gtacttctgg
361 tgactgtaca gtttgaaata ctatttttta tcaagtttta taaaaatgca gaattttgtt
421 ttactttttt tttttttttt taaaagctat gttgttagca cacagaacac ttcattgttg
481 tttttggggg aaggggcata tgtcactaat agaatgtctc caaagctgga ttgatgtgga
541 gaaaacacct ttcccttcta gttttgagag acttcctctt ggctcccagg aggagggatt
601 ccctgacttt gacacacatg gccaccttgg cacaaaagcc ttgtggtata gaaaaacaaa
661 tttgttttta tgtcctcttc tccctttcca tctttcagca tagacttaac tcccttaagc
721 ccagacatct gttgagacct gacccctagt cattggttac cagtgtgtca ggcaatctgg
781 actttccagt gatgccactg agatggcacc tgtcaaaaga gcagtggttc catttctaga
841 ttgtggatct tcagataaat tctgccattt tcatttcact tcctgaaagt cagggtcggc
901 ttgtgaaaag ttgttaaaca acatgctaaa tgtgaaatgt caaccctcac tctaaacttt
961 ccctgttcag agcatcagat gaagacttca ttgggtttta tagtggcttt ctgatttttg
1021 gtagtccatt gaagaaggga gtttgaaagt tgttgtatac tgttaacgat tgtctgccca
1081 tgtcctgcct gaaataccat gattgtttat ggaaagtatc tttaataaag ctggatacag
1141 tttggcttgg acaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//