LOCUS BC070282 644 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens hemoglobin, delta, mRNA (cDNA clone MGC:88275
IMAGE:30418964), complete cds.
ACCESSION BC070282
VERSION BC070282.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 644)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 644)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Narayan Bhat
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: p Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28302128.
FEATURES Location/Qualifiers
source 1..644
/db_xref="H-InvDB:HIT000264240"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88275 IMAGE:30418964"
/tissue_type="Blood, peripheral blood mononuclear cells
(PBMC) cytoplasmic poly A RNA is pooled sample from 3 and
6 hr after stimulation with PMA and Ionomycin. These
reagents are used to activate T- cells that results in
lymphokine and cytokine production."
/clone_lib="NIH_MGC_191"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..644
/gene="HBD"
/db_xref="GeneID:3045"
/db_xref="HGNC:HGNC:4829"
/db_xref="MIM:142000"
CDS 52..495
/gene="HBD"
/codon_start=1
/product="hemoglobin, delta"
/protein_id="AAH70282.1"
/db_xref="GeneID:3045"
/db_xref="HGNC:HGNC:4829"
/db_xref="MIM:142000"
/translation="MVHLTPEEKTAVNALWGKVNVDAVGGEALGRLLVVYPWTQRFFE
SFGDLSSPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFSQLSELHCDKLHVDPE
NFRLLGNVLVCVLARNFGKEFTPQMQAAYQKVVAGVANALAHKYH"
BASE COUNT 167 a 148 c 166 g 163 t
ORIGIN
1 gacactttct tctgacataa cagtgttcac tagcaacctc aaacagacac catggtgcat
61 ctgactcctg aggagaagac tgctgtcaat gccctgtggg gcaaagtgaa cgtggatgca
121 gttggtggtg aggccctggg cagattactg gtggtctacc cttggaccca gaggttcttt
181 gagtcctttg gggatctgtc ctctcctgat gctgttatgg gcaaccctaa ggtgaaggct
241 catggcaaga aggtgctagg tgcctttagt gatggcctgg ctcacctgga caacctcaag
301 ggcacttttt ctcagctgag tgagctgcac tgtgacaagc tgcacgtgga tcctgagaac
361 ttcaggctct tgggcaatgt gctggtgtgt gtgctggccc gcaactttgg caaggaattc
421 accccacaaa tgcaggctgc ctatcagaag gtggtggctg gtgtggctaa tgccctggct
481 cacaagtacc attgagatcc tggactgttt cctgataacc ataagaagac cctatttccc
541 tagattctat tttctgaact tgggaacaca atgcctactt caagggtatg gcttctgcct
601 aataaagaat gttcagcaaa aaaaaaaaaa aaaaaaaaaa aaaa
//